KEGG   Dipodomys ordii (Ord's kangaroo rat): 105987905
Entry
105987905         CDS       T07834                                 
Name
(RefSeq) integrin beta-5-like
  KO
K06588  integrin beta 5
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04145  Phagosome
dord04148  Efferocytosis
dord04151  PI3K-Akt signaling pathway
dord04510  Focal adhesion
dord04512  ECM-receptor interaction
dord04810  Regulation of actin cytoskeleton
dord04820  Cytoskeleton in muscle cells
dord05165  Human papillomavirus infection
dord05205  Proteoglycans in cancer
dord05410  Hypertrophic cardiomyopathy
dord05412  Arrhythmogenic right ventricular cardiomyopathy
dord05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:dord00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    105987905
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105987905
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105987905
   04148 Efferocytosis
    105987905
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105987905
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105987905
   04810 Regulation of actin cytoskeleton
    105987905
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    105987905
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    105987905
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    105987905
   05412 Arrhythmogenic right ventricular cardiomyopathy
    105987905
   05414 Dilated cardiomyopathy
    105987905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dord04131]
    105987905
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dord04515]
    105987905
Membrane trafficking [BR:dord04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    105987905
Cell adhesion molecules [BR:dord04515]
 Integrins
  Integrin beta subunits
   105987905
SSDB
Motif
Pfam: Integrin_beta EGF_integrin I-EGF_1 vWA_SIBA-E EGF_2 EGF_Teneurin
Other DBs
NCBI-GeneID: 105987905
NCBI-ProteinID: XP_012874778
UniProt: A0A1S3FDU0
LinkDB
Position
Unknown
AA seq 543 aa
MGSDVIQMMPQEVALNLRPGDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLG
TKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLL
PLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVP
HIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNH
YMLYKNFTALIPGTTVEILHGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLFFTATC
QDGVSYPGQRKCEGLKIGDTNLPVTVLKSTLVWKMLMWPDITIVYSSIRSKVELSVWDQP
EDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSVEARSCPSRHTEHKFALRPVGFR
DSLQVAVTYSCTCGCSAGLEPDSIRCSGNGTYVCGLCECNPSHLGTRCECQEGENQSGYQ
NLCREAEGKPLCSGRGECSCNQCSCFESEFGRIYGPFCECDSFSCARNKGVLCSEEALHL
APY
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgggctccgacgtcatccagatgatgccacaggaagtcgccctaaaccttcggcctggt
gaccagactactttccagctccaagtgcgccaggtggaagactaccctgtggatctgtac
tacctgatggacctttccctctctatgaaggacgacttggacagcattcgcaacctgggc
accaagcttgccgaggagatgaggaagctcacgagcaacttccggttgggttttgggtcc
tttgttgacaaggacatctctcctttttcctacacagcaccgaggtaccagacgaatcca
tgcattggttacaagttatttccaaactgcgtcccatcctttgggttccgccatctgcta
cctctcacagacagagtggacagcttcaatgaggaagttcggaaacagagggtgtccagg
aaccgcgatgcgcccgaggggggctttgatgcaatcctccaggccgctgtctgcaaggag
aagattggctggcggaaagatgcgttgcaccttctggtgttcacaacagatgatgtgccc
cacatcgcactggatgggaaactaggaggcctggtgcagccccacgatggccagtgccac
ttgaatgaggccaatgaatacactgcatccaaccagatggactacccatcccttgccctt
cttggagagaagttggcagagaataacatcaatctcatctttgctgtgacaaaaaaccac
tatatgctctacaagaattttaccgctctgatacctggaaccacagtggagattttacat
ggagactccaaaaatatcattcaactgattatcaatgcatacagtagtatccggtctaaa
gtggagctgtctgtctgggaccagccagaagaccttaatctcttcttcactgctacctgc
caagatggtgtatcctacccaggccagaggaaatgtgagggtctgaagattggagacacg
aacttaccagtgactgtgttgaaatccactcttgtctggaaaatgctcatgtggccagat
atcacgattgtctacagtagtatccggtctaaagtggagctgtctgtctgggaccagcca
gaagaccttaatctcttcttcactgctacctgccaagatggtgtatcctacccaggccag
aggaaatgtgagggtctgaagattggagacacggcatcttttgaggtgtccgtggaggcc
cggagctgccctagcagacacacagagcacaagttcgccctgcggcccgtggggttccgg
gacagcctgcaggtggcggtcacctacagctgcacgtgcggctgcagtgcggggctggag
cccgacagcatcaggtgcagcgggaacggcacttacgtctgcggcctgtgtgagtgcaac
cccagccacctgggcaccaggtgtgagtgccaggaaggagagaaccagagcgggtaccag
aacctgtgccgggaggctgagggcaagccactgtgtagcgggcgcggggaatgcagctgc
aaccagtgctcctgctttgagagcgagttcgggaggatctacgggcccttctgcgagtgt
gacagcttctcctgcgccaggaacaagggcgtcctctgctcagaagaagctttgcatctt
gctccctactga

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