Dipodomys ordii (Ord's kangaroo rat): 105987905
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Entry
105987905 CDS
T07834
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04145
Phagosome
dord04148
Efferocytosis
dord04151
PI3K-Akt signaling pathway
dord04510
Focal adhesion
dord04512
ECM-receptor interaction
dord04810
Regulation of actin cytoskeleton
dord04820
Cytoskeleton in muscle cells
dord05165
Human papillomavirus infection
dord05205
Proteoglycans in cancer
dord05410
Hypertrophic cardiomyopathy
dord05412
Arrhythmogenic right ventricular cardiomyopathy
dord05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105987905
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105987905
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105987905
04148 Efferocytosis
105987905
09144 Cellular community - eukaryotes
04510 Focal adhesion
105987905
09142 Cell motility
04820 Cytoskeleton in muscle cells
105987905
04810 Regulation of actin cytoskeleton
105987905
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
105987905
09172 Infectious disease: viral
05165 Human papillomavirus infection
105987905
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
105987905
05412 Arrhythmogenic right ventricular cardiomyopathy
105987905
05414 Dilated cardiomyopathy
105987905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105987905
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105987905
Membrane trafficking [BR:
dord04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105987905
Cell adhesion molecules [BR:
dord04515
]
Integrins
Integrin beta subunits
105987905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
I-EGF_1
vWA_SIBA-E
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
105987905
NCBI-ProteinID:
XP_012874778
UniProt:
A0A1S3FDU0
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MGSDVIQMMPQEVALNLRPGDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLG
TKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLL
PLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVP
HIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNH
YMLYKNFTALIPGTTVEILHGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLFFTATC
QDGVSYPGQRKCEGLKIGDTNLPVTVLKSTLVWKMLMWPDITIVYSSIRSKVELSVWDQP
EDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSVEARSCPSRHTEHKFALRPVGFR
DSLQVAVTYSCTCGCSAGLEPDSIRCSGNGTYVCGLCECNPSHLGTRCECQEGENQSGYQ
NLCREAEGKPLCSGRGECSCNQCSCFESEFGRIYGPFCECDSFSCARNKGVLCSEEALHL
APY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgacgtcatccagatgatgccacaggaagtcgccctaaaccttcggcctggt
gaccagactactttccagctccaagtgcgccaggtggaagactaccctgtggatctgtac
tacctgatggacctttccctctctatgaaggacgacttggacagcattcgcaacctgggc
accaagcttgccgaggagatgaggaagctcacgagcaacttccggttgggttttgggtcc
tttgttgacaaggacatctctcctttttcctacacagcaccgaggtaccagacgaatcca
tgcattggttacaagttatttccaaactgcgtcccatcctttgggttccgccatctgcta
cctctcacagacagagtggacagcttcaatgaggaagttcggaaacagagggtgtccagg
aaccgcgatgcgcccgaggggggctttgatgcaatcctccaggccgctgtctgcaaggag
aagattggctggcggaaagatgcgttgcaccttctggtgttcacaacagatgatgtgccc
cacatcgcactggatgggaaactaggaggcctggtgcagccccacgatggccagtgccac
ttgaatgaggccaatgaatacactgcatccaaccagatggactacccatcccttgccctt
cttggagagaagttggcagagaataacatcaatctcatctttgctgtgacaaaaaaccac
tatatgctctacaagaattttaccgctctgatacctggaaccacagtggagattttacat
ggagactccaaaaatatcattcaactgattatcaatgcatacagtagtatccggtctaaa
gtggagctgtctgtctgggaccagccagaagaccttaatctcttcttcactgctacctgc
caagatggtgtatcctacccaggccagaggaaatgtgagggtctgaagattggagacacg
aacttaccagtgactgtgttgaaatccactcttgtctggaaaatgctcatgtggccagat
atcacgattgtctacagtagtatccggtctaaagtggagctgtctgtctgggaccagcca
gaagaccttaatctcttcttcactgctacctgccaagatggtgtatcctacccaggccag
aggaaatgtgagggtctgaagattggagacacggcatcttttgaggtgtccgtggaggcc
cggagctgccctagcagacacacagagcacaagttcgccctgcggcccgtggggttccgg
gacagcctgcaggtggcggtcacctacagctgcacgtgcggctgcagtgcggggctggag
cccgacagcatcaggtgcagcgggaacggcacttacgtctgcggcctgtgtgagtgcaac
cccagccacctgggcaccaggtgtgagtgccaggaaggagagaaccagagcgggtaccag
aacctgtgccgggaggctgagggcaagccactgtgtagcgggcgcggggaatgcagctgc
aaccagtgctcctgctttgagagcgagttcgggaggatctacgggcccttctgcgagtgt
gacagcttctcctgcgccaggaacaagggcgtcctctgctcagaagaagctttgcatctt
gctccctactga
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