Dipodomys ordii (Ord's kangaroo rat): 105988276
Help
Entry
105988276 CDS
T07834
Symbol
Upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013
Nucleocytoplasmic transport
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105988276 (Upf3b)
03015 mRNA surveillance pathway
105988276 (Upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105988276 (Upf3b)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105988276 (Upf3b)
mRNA cycle factors
P-body specific factors
105988276 (Upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
105988276
NCBI-ProteinID:
XP_012875297
Ensembl:
ENSDORG00000006077
UniProt:
A0A1S3FHA3
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MKEDKEHRPKEKRVTLITPQGASGGSSGSGGGVSGCGGTSGEGGKGEDRQDRNRDRKEAM
SKVVIRRLPPTLTKEQLQENLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILF
RDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKRKTKKRDTKVGTIDDDPDYRKFLESYATD
EKMTSTPETLLEEIEAKNRELIAKRTTPLLSFLKNKQRMREEKREERRRREIERKRQREE
ERRKWKEEEKRKRKDIEKLKKIERVPEREKIKDEPKIKVHRFLLQAVNQKNLLKKPEKGD
EKELDKREKPKKLDKENLSDDRASGQSCMLPKRPESELKDEKPKRLEEESCRDYRDRDYE
REQERMHRERERLKRQEEERRRQKERYEKEKSFKRKEEELRKEREALRDKGKKVESTESL
SSSEKNEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKCGDPTIEKKQESA
ISHRKEGGEE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaggagcacaggcccaaggagaagcgagtcaccctgataacgcctcag
ggggcctccggcggcagcagcggcagcggcggcggcgtcagcggctgcggcgggacttca
ggggaaggtggtaaaggggaagatcgacaggatcgcaatcgggacaggaaagaagcaatg
agcaaggtggtaattcgaagattacctcccactttgaccaaggagcagcttcaggaaaat
cttcaacctatgcctgagcatgattattttgagtttttttctaatgatactagtctctat
cctcatatgtatgccagagcatacatcaactttaaaaaccaagaggacattattttattc
agggatcgctttgatggttatgtgttccttgacaataaaggtcaggaatatcctgctata
gtagaatttgcaccttttcaaaaagctgcaaaaaggaagactaagaaaagagataccaaa
gttgggactattgatgatgatcctgactacagaaaatttttggagagttatgccacagat
gagaaaatgacatccactccagagacattgctagaggaaatagaagccaaaaacagagaa
ttaatagccaaaagaacaacgccacttttgagctttctgaaaaacaagcagagaatgaga
gaagagaagagggaagaaagaaggagacgagaaatagaaagaaaacgacaacgagaagaa
gaaagaaggaaatggaaagaagaagaaaaacggaaaagaaaagatattgaaaagctaaag
aagatagaaagagttccagaaagagaaaaaataaaggatgaaccaaagatcaaggtacac
aggtttctgttacaagctgtgaatcagaaaaatctgctcaagaaaccagaaaaaggagat
gaaaaggaattggacaaaagagaaaagcctaaaaaattagacaaggagaatctgagtgat
gacagagccagtgggcagagttgcatgctgcccaaacgacctgagagtgaactaaaagat
gaaaagccaaagagacttgaagaggagagttgcagagactacagggaccgagattatgaa
cgagaacaggagcgcatgcaccgagaaagagagagactgaagcgtcaagaagaggagcgc
cgtagacaaaaggaacgctatgagaaagagaagtctttcaaaagaaaagaagaagagctt
agaaaagagagagaagcacttcgggataaaggaaagaaggttgaaagtactgaatcacta
agcagctcagaaaaaaacgaaaagaaagaggaagtggttaagagagatcggataagaaac
aaggatcgtccagcaatgcagctttaccaaccaggagctcgaagccgaaatcgactttgc
cctccagatgacagcaccaagtgtggagatccaacaatagaaaaaaagcaggaaagtgct
attagccatagaaaagaaggaggagaagagtga
DBGET
integrated database retrieval system
