Dipodomys ordii (Ord's kangaroo rat): 105988299
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Entry
105988299 CDS
T07834
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105988299 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105988299 (Polr1b)
Enzymes [BR:
dord01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105988299 (Polr1b)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105988299 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
105988299
NCBI-ProteinID:
XP_012875335
Ensembl:
ENSDORG00000014309
UniProt:
A0A1S3FGA8
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDSGGRWRNLPSGPSLKHLTDPSYRLPPEQQKAALQDLTRAHVDSFNYAVQEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGITKGVIKQFLGYVPIMVKSKVCNLHGLSPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPLALVRPKWKSRGPGYTHFGVSMYCVKEEHSAVNMNLHYVENGTVTLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNLPDWYPNEQAAEFLFNQCICIHLSTNTEKFYKLCFMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLRFLKEKMETWLVSIKIALDKRAQKTNVSINSENLMKIF
SMGADLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTTSIPALLCSLGVT
PVDGTPHQPYGKCYPVLLDGVMVGWVDKELAPGIEDSLRRFKVLREKKISPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEILEGITTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPFMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGTVYKSEFID
LSEKIKQGDDSLVFGVKPGDSRIAQKLDDDGLPFIGAKLQHGDPYYSYLNLNTGENFVVY
YKSKENCVVDNIKVCSNDSGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNYYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDGSVAHVCVRCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggattctggaggtcggtggaggaacttgccgagtggacctagcttaaagcatctgacg
gacccctcttaccggctcccgccagagcagcagaaggcggcgttgcaggacctgacacgt
gctcatgtggactccttcaactacgcggtgcaggaggggctcagccacgcggtgcaggct
atccctccctttgaatttgctttcaaagatgaacggatctctcttactattgtggatgct
gtcatcagtccaccaacggttccaaaaggtaccatctgcaaagaactcaacgtttatcca
gcagaatgtcgaggccggaggagtacctaccgtgggaagctgacagctgatatcagctgg
gcagtgaatggaatcacaaaaggagtcattaaacagtttcttggctatgttcccattatg
gtgaagtctaaggtttgcaacttacatggcctttctccacaagccctcattgagcatcat
gaggaagcagaggaaatgggaggctattttattatcaatggcattgaaaaagttatccga
atgttgattatgcctcggaggaattttccccttgcactggtaagaccaaaatggaaaagc
agaggccctggttatactcactttggagtctctatgtactgtgtaaaggaggagcattca
gctgtcaatatgaatcttcactatgtggaaaatggcactgttacattgaactttatttac
cggaaagaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttct
gattatcagattttccaggagctcatcaaaggaaaagaggatgactctttctttaggaat
tctgtttctcagatgttaaggattgtgatggaagagggttgttccacacaaaaacaagtc
cttaactatctaggagaatgcttcagagtaaaactcaatcttcctgactggtaccctaat
gaacaagctgccgagtttctatttaaccagtgcatctgcatccacttgagcaccaatact
gaaaagttttataagctctgtttcatgacccggaagctctttgctttagccagaggagag
tgcatggaggacaatcctgatagtttagtgaatcaagaagtccttacgcctggccagctc
ttccttaggtttctcaaggaaaaaatggaaacttggttagtgtctattaagatagcttta
gataaaagggctcagaaaaccaatgtgtccataaacagtgaaaatttgatgaagattttt
agtatgggagcagaccttacaagaccatttgaatatctccttgctactgggaatctgcgt
tcaaaaacaggtcttggcttcctgcaagattcaggactgtgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggagctgcttttgcgaag
atgaggaccaccacagtccgcagactgctgccagagtcctggggcttcctttgtcctgtg
cacaccccagatggggagccctgtggactgatgaaccatttaactgccatatgtgaggtc
gttacacaatctgtgtatacaacgtctattccagccttgctctgcagcttgggagtcact
ccagttgatgggacaccacaccaaccctatggcaagtgctacccagttctgctggatggt
gtcatggtgggctgggtggataaggagcttgctcctggcattgaagattctctccggcgt
tttaaggtattgagagagaaaaagatttctccctggatggaggtggtccttattcctatg
acaggaaagccaagtctgtaccctgggctgtttctcttcaccactccttgcagactggta
cggcctgtgcagaacctggagctaggcaaagaagaactgattggaactatggaacagctc
ttcatgaacattgctatctttgaagatgagattcttgaaggaattaccactcaccaggag
ctcttcccccatagcctgctgagtgtgatcgccaacttcatcccattctctgatcacaat
cagagtccccgcaacatgtaccagtgccagatgggtaaacagactatgggctttccactt
ctcacttaccaagacagatctgataataaactctaccgtcttcagactccacaaagtcct
ttagtaagaccattcatgtatgactattatgacatggataactatccgatagggacaaat
gctatcgttgctgtgatttcttatactggctatgatatggaagatgccatgattgtgaac
aaggcttcttgggagcgaggctttgcgcatggaactgtctacaagtctgagttcatagac
ctctctgaaaagatcaaacaaggagatgatagtcttgtgtttggggtcaaacctggtgac
tcacggattgcgcaaaagttagatgatgatggattgccattcataggagcaaagctgcaa
catggagacccctattacagctacctaaacctcaatactggggagaacttcgtggtttac
tataagagtaaagaaaattgtgtagtggataatatcaaagtgtgcagcaacgattctggg
agtgggaagttcaagtgtatctgtatcaccatgcgagtcccccggaacccaactattgga
gataaatttgccagtcgtcatgggcagaagggcatcttgagcagattgtggccagctgag
gacatgcctttcactgagagtgggatggtgcctgacattctgttcaatcctcacggtttt
ccatcccgcatgaccattggcatgctaatcgaaagtatggctggaaagtctgcagctctg
catggtctctgccatgatgccacacccttcatcttctctgaagagaactcagccttagaa
tactttggtgagatgttgaaggctgccggctataactactatggcactgagaggttgtat
agtggcatcagtggggtggaattggaagcagacattttcataggtgtagtttattatcaa
cgtttacgccacatggtatctgacaaatttcaggttaggacaactggagctagggacaaa
gtcaccaaccagcctgttgggggaagaaatgtccagggtggaatccgttttggggagatg
gaacgggatgctcttttggctcatgggacatcttttcttctgcatgaccgcctcttcaac
tgctctgacggctcggtagctcatgtgtgtgtcagatgtggcagtctgctctctcctttg
ttggagaagccacccccttcttggtctgccatgcgtaaccgaaagtacaattgcaccctg
tgtaatcgcagtgacaccattgacactgtttctgtgccttacgttttccggtattttgta
gctgaactggcagccatgaacatcaaagtgaaattggatgtcgcttag
DBGET
integrated database retrieval system
