Dipodomys ordii (Ord's kangaroo rat): 105988418
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Entry
105988418 CDS
T07834
Symbol
Lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03018
RNA degradation
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105988418 (Lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
105988418 (Lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105988418 (Lsm8)
03041 Spliceosome [BR:
dord03041
]
105988418 (Lsm8)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105988418 (Lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
105988418 (Lsm8)
Spliceosome [BR:
dord03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105988418 (Lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
105988418
NCBI-ProteinID:
XP_012875516
Ensembl:
ENSDORG00000027868
UniProt:
A0A1S3FG90
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgcgctggagaactacatcaacagaactgttgctgttattacttctgatggg
agaatgattgtgggaacattaaagggctttgaccagaccattaatctgattttggatgaa
agccatgaacgagtattcagctcttcacagggagtagaacaggtggtgttaggattatac
atcgtcagaggtgacaatgtggcagtcattggagaaattgatgaagagacagattctgca
cttgacttggggaatattcgagcagaacctctaaactctgtagcacactga
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integrated database retrieval system
