Dipodomys ordii (Ord's kangaroo rat): 105988617
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Entry
105988617 CDS
T07834
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dord04515
]
105988617
Cell adhesion molecules [BR:
dord04515
]
Cadherins
Protocadherins
105988617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Ig_VWA7
Motif
Other DBs
NCBI-GeneID:
105988617
NCBI-ProteinID:
XP_012875742
UniProt:
A0A1S3FIL0
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MELGKESAQQIRQVLLFFVFLGRSSVCSEIWSYSVAEETEIGSFVGNVIKDMGSGVENLA
VRGARVIFDDYKPYLGLDLQTGNLLLNERLDREALCDITEPCILHFQVLFENPLQFFQAE
LLVKDINDHTPVFLEKQILLKISEGTTPGTSFQMDSAQDLDIGNNSVQNYTISPNPHFHL
KLQDSAEGRKYPELVLIQPLDREKEPEVSLTLTAVDGGSTPRSGTVLIRVVVMDINDNAP
EFERPVYEVQIPENSPVGSMVIKVSATDSDVGTNGELSYSFSHPSRDGLKTFEIHPVSGE
IHLKGVLDFEIIRSYTINIQAIDGGGLSGKSVITVQVLDVNDNPPEIVITSLTTLIPENF
SPEMVVAVFSLRDQDAGDNGKMICSITDNLPFLLKPTFKNFYTLVTERPLDREIKDEYNI
TITVSDLGTPRLQTQHTITLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRD
SGSNAQLTYSLLPGPQPGADAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGS
PPLSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQ
NAWLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTL
HVLLVDGFSQPYLPLPDAAAPERXDRLTAYLVIALAAVSSLFLLSLLLFVAVRLCRRSRA
RSLAGCALPDGPLPGHLLDVSGTGTLSQFYQYEVGLKGDSGSNEFKFLKSVILNHRGALN
GVEENPPM
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggagctggggaaagagagcgctcagcagataaggcaagtgctgcttttctttgttttc
ctgggaaggtcctcggtttgttctgagatttggagttattcggttgcagaggaaactgag
atcggctcttttgtaggcaatgtgattaaagatatgggttctggtgtggaaaacctggct
gtgagaggtgccagggtcatctttgatgactataaaccttacttgggtttggatctgcag
actggcaacttgctcttaaatgaacgactggaccgagaggcactgtgtgatatcactgaa
ccctgcatactgcatttccaggtgttattcgaaaatcctttgcaatttttccaagctgag
cttttggttaaagatataaatgaccacactcctgtgttcctagaaaaacaaatactttta
aaaatctcagaaggtactactccaggaacctcattccaaatggacagtgctcaggactta
gatataggaaataatagtgttcaaaattacacaataagccccaaccctcattttcacctt
aaattacaagacagcgctgaaggtagaaaatacccagagttggtactgatccaacctcta
gacagagaaaaggaacctgaggttagcttaacgctaacagccgtagatggaggatcaacg
ccaagatctgggactgtgctgattagagtagtggtcatggatattaatgacaatgcccct
gagtttgagagaccggtctatgaggttcaaatacccgagaacagccctgtgggctccatg
gtaatcaaggtatctgctacagattcagatgtaggaacaaacggagaactctcttactca
ttctctcatccctctagagatggactgaaaacatttgaaatccatccagtttctggagaa
atccatttgaaaggagttctggattttgagataattcggtcttacacaataaacattcag
gccatagatggtgggggtctttctgggaaatcagttattactgttcaggttttagacgtg
aatgacaacccaccagaaatagtcattacgtcacttaccaccctcataccagaaaatttt
tcacctgagatggtagtcgctgttttcagtttacgagaccaagatgctggagacaatgga
aagatgatttgctcaattacagacaacctcccctttctcttaaaacccaccttcaaaaat
ttctacaccctggtaacagaacgtccactggatagagagataaaagatgaatacaacatc
accatcaccgtctccgacttggggactcccaggctgcaaacccagcacaccatcaccctg
caggtgtccgacgtgaacgacaacgcccccgaattcacgcagtcgtcctacaccctgtgg
gtccgcgagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagac
tcgggcagcaacgcccagctgacctactcgctgctgcccggcccgcagcccggcgccgac
gcggcggcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcg
ctggactatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcg
cccccgctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcg
cccttcgtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagg
gcggccgagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccag
aacgcctggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtgg
ccgcacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcac
aggctgctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctg
cacgtgctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcg
cccgagcgcnncgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtcttct
ctcttcctcttgtctctgctgctcttcgtggccgtcaggctgtgcaggaggagcagggcg
cgctcgctggccggctgcgcgctgcccgatggccccttgcctggacacctgctggacgtg
agtggcacggggaccctgtctcagttttaccagtatgaagttggtctcaaaggagactct
gggagtaacgagtttaagttcctgaagtctgttattctgaaccatcgtggagctttgaat
ggggtagaagaaaatccacctatgtaa
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