Dipodomys ordii (Ord's kangaroo rat): 105988874 Help Entry 105988874         CDS       T07834                                  Symbol Atg4c Name (RefSeq) cysteine protease ATG4C   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord04136   Autophagy - other dord04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:dord00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105988874 (Atg4c)    04136 Autophagy - other     105988874 (Atg4c)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:dord01002]     105988874 (Atg4c)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dord04131]     105988874 (Atg4c)    03029 Mitochondrial biogenesis [BR:dord03029]     105988874 (Atg4c) Peptidases and inhibitors [BR:dord01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    105988874 (Atg4c) Membrane trafficking [BR:dord04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     105988874 (Atg4c) Mitochondrial biogenesis [BR:dord03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     105988874 (Atg4c) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  105988874 NCBI-ProteinID:  XP_012876095 Ensembl:  ENSDORG00000027209 UniProt:  A0A1S3FIF0 LinkDB All DBs Position Unknown AA seq 458 aa AA seqDB search MEATGTDEVDKLKTKFVSAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKTLL ARSGCAIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL AQGLILHFLGRAWTWPDALNIENSDSESWTSHTVKKFTTSFEASLSGERELKTPTISLKE KVKKYSDDHEIQNEIYHRKIISWFGDSPLALFGLHQLVEYGKKSGKKAGDWYGPAVVAHI LRKAVEEAKHPDLQGITIYVAQDCTVYSCDVIDKQSASMTSGNADDKAVIILVPVRLGGE RTNTDYLEFMKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKFSSKEKYPLFTFVN GHSRDYDFTSSTTNEEDLFSEDEKRQLKRFSTEEFVLL NT seq 1377 nt NT seq  +upstreamnt  +downstreamnt atggaggccacaggaacagatgaagttgacaagttaaaaaccaaatttgtatctgcttgg aacaacatgaaatacagttgggtgttaaaaacaaagacgtattttagtagaaattcccct gtgttattacttggtaaatgttatcattttaaatatgaggatgaaaataaaacattactt gcaagatcaggatgtgcaatagaagatcatgtaattgcgggaaatgtagaagaatttcgt aaagatttcatttctagaatatggctgacctacagggaagaatttcctcaaatagagggc tcagccttgacaacagattgtggttggggctgtacactaagaactggccaaatgctcttg gctcaaggactcatactacactttcttggtagagcttggacttggcctgatgcactgaat attgaaaattcagactctgaatcatggacttcccacactgtgaaaaaatttactacatct tttgaagcatcgctttcaggagaaagagaactcaaaactccaacgatttctctgaaggaa aaagttaagaaatattctgatgatcatgaaattcaaaatgaaatttaccataggaaaatc atttcctggtttggtgattccccgttggctctttttggcttacatcaactagtggaatat ggaaagaaatctgggaaaaaagctggagattggtatggaccagctgttgttgctcacatt ttaagaaaagcagttgaagaagcaaaacaccctgatttacaaggaataactatttatgtt gcacaagactgtacagtttacagttgtgatgtaatcgataaacaaagtgcttcaatgact tctggtaatgctgatgacaaagctgttattattttagttcctgtaagacttggtggagaa agaaccaacacagactacctggagttcatgaagggtgttctaagccttgaatactgtgtg ggtattattggtggtaaaccaaaacagtcatactactttgctggatttcaagatgacagt ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa atcactaagatgctgaaattttcttctaaggaaaaatatcccttatttacttttgtaaat ggccattccagagactatgattttacatcttctactaccaatgaagaagacctgttttca gaggatgagaagagacaattaaaaagatttagcacagaagaatttgtcttactttaa

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