Dipodomys ordii (Ord's kangaroo rat): 105989824
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Entry
105989824 CDS
T07834
Symbol
Poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105989824 (Poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dord03037
]
105989824 (Poc1b)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
105989824 (Poc1b)
Cilium and associated proteins [BR:
dord03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105989824 (Poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
eIF2A
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Nup120_160
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_like
Cytochrom_D1
PEP5_VPS11_N
WDR54
Beta-prop_WDR75_2nd
PROPPIN
Beta-prop_ELP1_1st
Beta-prop_WDR11_2nd
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
105989824
NCBI-ProteinID:
XP_012877503
Ensembl:
ENSDORG00000013903
UniProt:
A0A1S3FLP8
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MASAPEDPVLERYFKGHKAAVTSVSFNPNGKQLATASWDTFLMLWNLKPQARAYRYVGHK
DVVTSVQFSPQGNLLASASRDRTVRLWIPDKKGKSSEFKAHTAPVRSVDFSSDGQYLVTA
SEDKSIKVWNMHRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTVKIWDTTNKQCVN
NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHNCGVNCVSFHPSG
NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEMFASGGADAQVLLWKTN
FDELHSKDLNKRNLKRLHFDSQPHLLDIYPRTPHPHEGKVETVEINPKLDVIDLQSSSPP
VVDILSFDSTTTTDTIDRTQPDKNGEDISAYFMNPSLVQPGCSPAVRKKTEDVSDLLSDS
QRSVPLAVTDALEHIMEQLNVLTQTVSILEQRLTLTEDKLKDCLENQQKIFGTIHQKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccccggaggaccccgtcttggagcgttattttaaaggtcacaaagctgcg
gtcacctccgtgagcttcaaccccaacggcaaacagctcgctactgcatcctgggacacc
tttctcatgctatggaatttgaaaccacaagctagagcttacagatatgtaggtcacaag
gacgttgtaaccagcgtgcagttttctccacaagggaacttactagcatctgcctcacga
gacagaactgttagactctggattcctgataagaaagggaaatcttcagaatttaaagca
catacagctccagttcgaagtgtggacttctcatccgacggtcaatatcttgttacagct
tctgaagacaagtctatcaaagtatggaatatgcatcgccaacgcttcttatattcctta
taccgacacacacactgggtacgctgtgccaaattttcccctgatggaagactcatagta
tcgtgtagtgaagacaaaacggttaaaatttgggataccacaaataagcagtgtgttaat
aacttctctgattctgtaggatttgcaaattttgtggacttcaaccctaatgggacatgc
atagcttcagcaggttctgatcacaccgtgaaaatctgggatatccgagtaaacaaatta
ctccagcattatcaagttcacaactgtggagttaactgtgtgtcattccacccttcgggt
aactacctcatcactgcttcttctgatggcacccttaagattctggatctcttggaagga
agactcatatatacgcttcaaggacacacgggacctgtctttactgtttccttttccaaa
ggtggagagatgtttgcatcaggtggtgcagatgcacaggtcttactgtggaagactaac
tttgatgagttgcatagtaaagatcttaataaaagaaatctcaaaagattgcattttgat
tctcaaccacaccttctcgacatctacccaagaacaccacatccccatgagggaaaagtt
gagactgttgaaattaatccaaagcttgatgtaatcgatttgcaaagttcttctccccct
gttgtggacatcctttcttttgattctactacaacaacagacaccattgatagaactcag
ccagacaagaatggtgaggacatcagtgcgtatttcatgaacccatccttggtacaacca
gggtgttcaccagctgtgagaaagaagacagaagatgtgagtgacctgctgtctgacagt
caaagaagcgtaccacttgctgtgaccgatgcactagagcatatcatggagcagctcaac
gtcttgacacagactgtttcaattttggagcagcgactgactttgacagaggataagctg
aaagactgccttgaaaatcagcaaaagattttcggtaccatccaccagaaaagttga
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