KEGG   Dipodomys ordii (Ord's kangaroo rat): 105990275
Entry
105990275         CDS       T07834                                 
Symbol
Lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03018  RNA degradation
dord03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105990275 (Lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105990275 (Lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dord03019]
    105990275 (Lsm7)
   03041 Spliceosome [BR:dord03041]
    105990275 (Lsm7)
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105990275 (Lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105990275 (Lsm7)
Spliceosome [BR:dord03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105990275 (Lsm7)
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 105990275
NCBI-ProteinID: XP_012878092
Ensembl: ENSDORG00000024460
UniProt: A0A1S3FQG5
LinkDB
Position
Unknown
AA seq 109 aa
MGGGQELKDKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEY
MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQEA
NT seq 330 nt   +upstreamnt  +downstreamnt
atgggtggagggcaggagctgaaggacaaggagaagaagaagaaggagagcatcctagac
ttgtccaagtacattgacaagaccatcagggtgaagttccagggaggaagagaagccagt
ggaatcctgaagggcttcgacccgctgctcaacctcgtgctggacggcaccgtggagtac
atgcgagatcccgacgaccagtacaagctcacggaggacacgcggcagctgggcctggtg
gtgtgccggggcacgtcggtggtgctcatctgcccgcaggacggcatggaggccatcccc
aaccccttcatccagcagcaggaggcctag

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