Dipodomys ordii (Ord's kangaroo rat): 105990306
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Entry
105990306 CDS
T07834
Symbol
Gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105990306 (Gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105990306 (Gtf2f1)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105990306 (Gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
HTH_78
Motif
Other DBs
NCBI-GeneID:
105990306
NCBI-ProteinID:
XP_012878123
Ensembl:
ENSDORG00000002445
UniProt:
A0A1S3FNJ0
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MAALGPGSQSVTEYVVRVPKVVPATLIQARLERDLSNKKIYQEEEMPESGAGSEFNRKLR
EEARRKKYGIILKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTENTSYYIFTQCPDGAFE
AFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLKDQDQDEDEEEKEK
RSRKKASELRIHDLEDDLEMSSDASDASGEEGSKAPKSKKKAPLSKAGRKKKKKKGSDDE
AFEDSDDGDFEGQEVDYMSDGSSSPDEEAEGKPKVTQQEEGPKGVDEQSESSEESEEEKP
PEEEKEEEEKKAPTPQEKKRKKDSSEESDSSEESDIDSEASSALFMAKKKTPPKRERKPS
GGSSKGNSRPGTPSTEAGSTSSTLRAAASKLEQGKRSSETPAAKRLRLDGPQSLSGKSTP
QPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILK
RLNPERKMINDKMHFSLKE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctaggccccggcagccagagcgtcaccgagtacgtcgtccgcgtgcccaag
gtggtgcctgccacacttattcaggcccggctagagcgggacctgagcaacaagaagatt
taccaggaagaggagatgccagagtccggtgcgggcagtgagttcaaccggaagctgcgg
gaggaggcacgccgcaagaaatacggcatcatcctgaaggagttccggcctgaggaccag
ccctggctgctgcgcgtcaacggcaagtctggccggaagttcaagggcataaagaaggga
ggcgtgacagagaacacttcctactacatcttcacgcagtgccctgatggagcctttgaa
gccttccctgtccacaactggtacaacttcacgccactggcccggcaccgcacactcact
gccgaggaggcggaggaggagtgggagaggaggaacaaggttctgaaccacttcagtatc
atgcagcagcggcggctcaaggaccaggaccaggatgaggacgaggaggagaaggagaag
cgcagccgcaagaaggccagcgagctgcgcatccacgacctggaggacgacctggagatg
tcctcagatgccagcgatgccagcggcgaggagggcagcaaagcccccaagagcaagaag
aaggcccccctgagcaaggcgggcaggaagaagaagaagaagaagggctcagacgacgag
gccttcgaggacagtgatgacggggactttgagggccaggaagtggactacatgtccgat
ggctccagctctccagatgaggaggctgagggcaagcccaaggtcacgcagcaggaagag
ggccccaaaggggtggatgagcagagcgagagcagtgaggagagcgaggaggagaagccg
cccgaggaggaaaaggaggaggaggagaagaaggcgcccaccccacaggagaagaagcgc
aagaaagatagcagcgaggagtcagacagctcagaggagagcgacatcgacagcgaggcc
tcctcggccctcttcatggcgaagaagaagacgccccccaagagagagcggaagccatca
ggaggcagctcgaagggcaacagccggccgggcacacccagcaccgaggctggcagcaca
tcgtccaccctgcgtgcagcagccagcaagctagagcagggcaagcgcagcagcgagaca
ccagccgccaagcgcttgcggcttgatgggccgcaaagcctatctgggaagtccacccca
cagccgccctcgggcaagtccactccgagcagcggtgacgtgcaggtgaccgaggatgcc
gtgcgccgctacctgacgcggaagcccatgaccacgaaggacctgctgaagaagttccag
accaagaagacagggctgagcagcgagcagacggtgaacgtgctagcccagatcctcaag
cgcctcaaccccgagcgcaagatgatcaacgacaagatgcacttctccctgaaggagtga
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integrated database retrieval system
