KEGG   Dipodomys ordii (Ord's kangaroo rat): 105990459
Entry
105990459         CDS       T07834                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dord00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dord03036]
    105990459 (Kdm4b)
Enzymes [BR:dord01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     105990459 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     105990459 (Kdm4b)
Chromosome and associated proteins [BR:dord03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105990459 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 DUF4537 DUF7141 LBR_tudor
Other DBs
NCBI-GeneID: 105990459
NCBI-ProteinID: XP_012878340
Ensembl: ENSDORG00000008375
UniProt: A0A1S3FPP6
LinkDB
Position
Unknown
AA seq 1104 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGKDLTVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISLKENRHWRKTEEERKPSLERRREQTKKPGLASHRKRSQPRKAKPE
DPKSPGEGPAGAALLEEAPPENDPEEEDEEPPPAPQGQAREAEGTEEDGRGKLRPSKAKS
ERKKKSYGPLSSPLLSQLPPALPAPMPTEEALRLPPPPEPSALAPGPMAAEQGPSPVPLN
VVPPEVPGEEQDKPRPIIPMLYVVPRASVTPPDRDLGPSPQAAPMELTGPDEETKALASE
AQVPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEASPFSGEEDVNDPEALR
SLLSLQWESKAASFQAERKFNAAAALTEPYCAICALFYPYSQSVQTEKEATPGPLGEGAS
APPPSKSGQRTRPLIPEMCFTSSGGNTEPLPANSYVGDDGTSPLIACAKCCLQVHASCYG
VRPELAKDGWTCSRCAAHAWTAECCLCNLRGGALQTTTEHRWIHVICAIAVPEVRFLNVI
ERNPVDISGIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHATCAHAAGVLMEPD
DWPYVVSITCLKHTSPGHAAQLQRAVSLGQVVITKNRNGLYYRGRVIGSSSQTFYEVNFE
DGSYSDNLYPESITSRDCARLGPPPEGEVVELRWTDGNVYKAKFISSATSHIYQVEFEDG
SQLTVRRGDVFTLEEELPKRVRSRLSLSTGAPQEPSFSGEEVKAAKRPRVGTPITPSEDS
GRSPDYLAFMESLLQAQGRPGAPF
NT seq 3315 nt   +upstreamnt  +downstreamnt
atggggtctgaggaccatggggcccagaaccccagctgcaagatcatgacattccgtcca
accatggaggaatttaaggacttcaacaaatacgtggcctacatagaatcacagggagcc
caccgggcgggcctggccaagatcatccccccaaaggagtggaagccgcggcagacttac
gatgacatcgacgacgtggtcatcccggcgcccatccagcaagtggtgaccgggcagtca
ggcctcttcacccagtacaacatccagaaaaaggccatgaccgtgggggagtaccgacgg
cttgccaacagtgagaagtactgtacccctcgacaccaggactttgacgacctggaacgc
aagtactggaagaacctcacgttcgtgtctcccatctacggggctgacatcagtggctct
ctgtacgatgacgacgtggcgcagtggaacatcggcaacctgcggaccatcctggacatg
gtggagcgggagtgcggcaccatcattgagggcgtcaacacgccctacctgtacttcggc
atgtggaagaccacctttgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcatttcggggagcccaagtcctggtacgccatcccccctgagcatggcaaacgcctg
gagcggctggctatcggcttcttccccgggagctcccagggctgcgatgccttcctgcgc
cacaagatgaccctcatctcacccatcatcctgaagaagtatgggatccccttcagcagg
atcacacaggaggctggggagttcatgatcacgtttccctacggctaccacgctggcttc
aaccatggattcaactgcgccgagtccactaactttgccacgctacggtggattgattac
ggcaaagtggccactcagtgcacgtgccggaaggacatggtgaagatctccatggatgtc
ttcgtgcgcatcctgcagcccgagcgctacgagcagtggaaacagggcaaggacctcact
gtcctggaccacaccaggcccacggccctgagcagcccggaactcagctcctggagcgcc
tcgcgcgcctcgctgaaggccaagctcctgcgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggagaggaaacccagtctagagaggaggagagagcagacc
aaaaagcccgggctggcgtcccaccggaagcgcagccagcccagaaaagccaagcctgag
gaccccaagtccccaggggaggggccggccggtgcagccctcctggaggaggccccacct
gagaatgacccagaagaggaggatgaggagccgccgccagccccacagggccaggcccgg
gaggccgagggcacagaagaggatgggaggggcaagctgcggcccagcaaggccaagagc
gagcggaaaaagaagagctatggccccctctcgtccccactgctgtcgcagctgccgcca
gccctgccagccccgatgcccaccgaggaggccctgcggctgccgcccccacccgagccc
tcggcgctggccccggggcccatggcggctgaacagggcccctcccccgtgcccctcaat
gtggtgccgcccgaggtccctggggaggagcaggacaagcctcggcccatcatccccatg
ctctatgtggtgccccgggccagcgtcaccccgccggacagggacctcgggcctagcccc
caggcggcccccatggagctgacggggcccgacgaggagaccaaagccctggccagtgag
gcgcaggttccctccaccttttccaagttaaagatggaaatcaagaagagccgccgccac
ccactgggcaggccgcccacccggtccccgctgtccgtggtgaagcaggaggcctcgagt
gatgaggaagcatccccgttctctggggaggaggacgtgaacgaccccgaggcgctgcgg
tccctgctgtcgctgcagtgggagagcaaggccgccagcttccaggccgagcgcaagttc
aacgccgcggccgccctcaccgagccctactgtgccatctgcgccctcttctacccctac
agccagtctgtacagacagagaaggaggccaccccgggccccctcggggagggggcctct
gccccgccgccttccaagagcggccagcggactcgaccgctcatcccagaaatgtgcttc
acgtccagcggggggaacaccgagccgctgcccgccaactcctacgtgggtgacgacggc
accagcccgctcatcgcctgcgccaagtgttgcctgcaggtccacgccagttgctacggg
gtccggccagagctggccaaggacggctggacgtgctcccggtgtgcggcccacgcctgg
actgcggaatgctgcctgtgcaacctccggggaggggcgctgcagaccaccaccgaacac
aggtggatccacgtgatctgcgccatcgccgtacctgaggttcggttcctgaacgtgatc
gagcgcaacccggtggacatcagcggcattcccgagcagcggtggaagctgaagtgcgtg
tactgccggaagcggatgaagaaggtgtcaggtgcctgcatccagtgctcctacgagcac
tgctccacctccttccacgccacgtgcgcccacgcagccggcgtcctcatggagccagac
gactggccctacgtggtctctatcacctgcctcaagcacacgtcccccgggcatgctgca
cagctccagagggccgtatcactgggccaggtggtcatcaccaagaaccgcaacgggctc
tactaccgcgggcgtgtcatcggctccagctcacagaccttctacgaggtgaacttcgag
gatgggtcctacagcgacaacctgtaccccgagagcatcacgagcagagactgcgcgcgg
ctggggccgccgcccgagggcgaggttgtggagctgcggtggacggacggcaatgtctac
aaggccaagttcatctcctctgccaccagtcacatctaccaggtggagtttgaggatggg
agccagctgacagtgaggcgtggtgacgtcttcacgctggaggaggagctccccaagagg
gtgcggtcccggctgtcactcagcactggggcaccccaggagcccagcttctcaggagaa
gaggtgaaggctgccaagcgcccacgagttggcaccccgatcaccccctccgaggactcg
gggcgcagcccggactacctggccttcatggagagcctcctgcaggcgcagggccggccg
ggagctcctttctag

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