Dipodomys ordii (Ord's kangaroo rat): 105990807
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Entry
105990807 CDS
T07834
Symbol
Abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord02010
ABC transporters
dord04148
Efferocytosis
dord04975
Fat digestion and absorption
dord04979
Cholesterol metabolism
dord05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105990807 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105990807 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
105990807 (Abca1)
04979 Cholesterol metabolism
105990807 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
105990807 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dord02000
]
105990807 (Abca1)
Transporters [BR:
dord02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105990807 (Abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
105990807
NCBI-ProteinID:
XP_012878746
Ensembl:
ENSDORG00000000957
UniProt:
A0A1S3FQ92
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFDKSIVSRLFSDARKFLLFSQKDT
SMKDIHRVLRTLHQIKNSGPSLKLQDFLVDNETFSGFLYHNLSLPRPTVHRLLQANVSLH
KVFLQGYQLHLTNLCNGSKLGDTIQISEPEFSELCGQPREKLDVAEQVLRSNRDILKPIV
IGLNSTSSFPIQQLVEATRTLLDSLGSLAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDADSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESSQEMDLVRMLLESKSNDQFWEQQLDGLDWTAQDIIAFLAKHPEDIQSSNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIVFTG
VSPGSTELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVIILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFAVKMFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEGDGFNLTTAVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKGISEICMEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRVFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFLALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPDTPCLVGEEEWTTAA
VPQTIVDLFQNGNWTMENPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSQEVKDAIKQVKK
HLRLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGEDRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDDDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSS
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLAKIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDMAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagttgaggttgctgctgtggaagaacctgactttcagaagaaga
caaacatgtcagctgctgctggaagtggcctggcctttgttcatcttcttcatcttgatc
tctgtccggctgagctatccaccctatgaacaacatgaatgccactttccaaataaagcc
atgccatcggcagggacgcttccttgggttcaggggattatctgtaatgccaacaatccc
tgtttccgttacccaacacctggggaggctcctggtgttgttggaaactttgacaaatcc
attgtgtctcgcctgttctcagatgctcggaagtttcttttattcagccagaaagacacc
agcatgaaggacatacacagagttctgagaacattgcatcagatcaagaattccggccca
agcttgaagcttcaggatttcctggtggataatgaaaccttctctggatttctgtatcac
aatctctctctcccaaggccaactgtgcacagattgctgcaggctaatgtcagtctgcac
aaggtatttttgcaaggttaccagttgcatttgaccaatctgtgcaatggatcaaaatta
ggagataccattcaaatcagtgagccagaattttctgagctttgtgggcaacccagggag
aagctggatgtggcagagcaggtgcttcgttccaacagggacattctgaagccgattgtg
ataggactaaactccacatcttccttcccaattcagcagctggtggaagctactagaact
ttattggatagtcttggaagtctggcccaagagctgttcagcatgaggagctggagtgac
atgcggcaggaggtgatgtttctaaccaatgtgaacagcagcagctcctccacgcagata
taccaggctgtgtcccgtatcgtctgtggccatccagagggcgggggactgaagatcaag
tctcttaactggtatgaggacaacaactacaaagccctctttggaggcaatggcacggaa
gaagatgctgacagcttctatgacaactctacaactccttactgtaatgatctgatgaag
aatttggagtctagtcctctttctcgcattatttggaaagctctcaagcctctgcttgtt
ggaaagattctgtatacacctgacactccagccacgagacaggttatggctgaggtgaac
aagaccttccaggaactggctgtctttcatgatctggaaggcatgtgggaagaactcagt
cctaagatttggaccttcatggagagtagccaagaaatggaccttgtgcggatgctgttg
gaaagcaaaagcaatgaccagttttgggaacagcaattagatggcttagattggacagcc
caagatatcattgcatttctggccaaacacccagaggatattcagtcctctaatggctcc
gtatatacctggagagaggctttcaatgagaccaaccaggcaatccagacaatatctcgc
ttcatggagtgtgtcaacctgaacaagctggaacccataccgactgaagtccgactcatc
aacaagtccatggagctgctggatgagaggaagttctgggctggtattgtgttcacgggt
gtcagtccaggcagtactgaactgccccgtcatgtcaagtacaagatccgaatggacatt
gacaatgtggaaaggaccaataaaatcaaagatgggtattgggaccctggtcctcgggct
gacccatttgaggacatgcggtatgtctggggaggcttcgcctatctgcaggatgtggtg
gagcaggcaatcataagggtgttgactggtactgagaagaaaacaggtgtctatatgcaa
cagatgccctacccctgttacgttgatgacatcttcctacgggtgatgagccggtcgatg
cccctcttcatgacactggcctggatttactctgtggctgttatcatcaagggcatcgtg
tatgagaaggaggcacggctgaaggagaccatgcggatcatgggcctggataatggcatc
ctctggtttagctggttcatcagtagtctcatccctctacttgtgagtgccggcctactg
gttatcatcttgaagttaggaaacctgctgccctacagcgaccccagtgtggtgtttgtc
ttcctgtctgtatttgcggtggtgaccatcctgcagtgcttcctgattagcacactcttc
tcccgggccaacctggcggcagcctgcgggggcatcatctacttcacgctgtacctgccc
tacgtcctgtgtgtggcatggcaagactatgtaggctttgcagtcaagatgtttgtgagc
ctgctgtctcctgtggcttttgggtttggctgtgagtacttcgcgctttttgaggaacaa
ggcatcggtgtgcagtgggacaacctctttgagagtcctgtggagggagatggcttcaat
ctcaccactgctgtctccatgatgttgtttgataccttcctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggtcagtatggaattcccaggccctggtattttccttgt
accaagtcttactggtttggtgaagaaagtgatgagaagagccaccctggttccaatcag
aaaggaatatcagaaatctgcatggaagaagaacccacgcatctgaagctgggtgtgtcc
attcagaacctggtgaaggtttaccgagatggcatgaaggtggccgttgatggcctggca
ctgaatttttatgagggacagatcacctccttcctgggccacaatggagcagggaagaca
accaccatgtccatcctgactggcttgttccctcccacctcgggcactgcttacatcctg
gggaaggacattcgctctgagttgagcaccattcggcagaacctcggtgtctgtccccag
cataatgtcctgtttgacatgttgacggtggaagagcacatctggttctacgcccgcctg
aaggggctctcagagaaacacgtgaaagcagagatggagcagatggccttggatgttggt
ttgccacccagcaagctgaaaagcaaaacaagtcagctgtcaggtgggatgcaaagaaag
ctgtctgttgccctggccttcgtgggaggatccaaggttgttattctggatgagcccaca
gctggtgtggacccttactctcgcaggggaatatgggaactactgttgaaatatcgccaa
ggccgtaccatcattctctctacacatcacatggatgaagcagacgtcctgggagacagg
attgccatcatctcccatgggaagctgtgttgtgtgggctcttccttgttcctgaaaaac
cagctgggaacaggctactatctgactctggtcaagaaagatgtggaatcttctctcagt
tcttgcaggaatagcagcagcactgtgtcttacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtg
tctgcaatctccaacctcatcaggaagcatgtatctgaagcccggctggtagaagacatt
ggacatgagttgacttatgtgctgccatatgaagcagctaaggagggagcctttgtggaa
cttttccacgagattgatgaccggctctcagacttgggcatctctagttatggcatctca
gagactaccctagaagaaatattccttaaagtggcagaagagagtggagtggatgcagag
acttcagatggaaccttgccagcaagacggaacaggcgggtctttggggacaagcagagc
tgtctgcgtccattcactgaagatgatgctattgatccgaatgactctgacatcgaccca
gaatccagagagactgacctgctcagtggaatggatggcaaaggctcctaccaggtgaag
ggctggaaactgacccagcaacagtttttagctcttttatggaagaggctgctgattgcc
aaaaggagtaggaaaggattttttgctcagattgtcctgccagctgtgtttgtctgcatt
gctctggtgttcagcctgatcgtaccaccctttggcaagtaccccagcctggaacttcag
ccttggatgtacaatgagcagtatacatttgtcagtaatgatgctcctgaagatatggga
acccaagagctcttgaatgccctcaccaaggaccctggctttggaacccgttgtatggaa
ggaaacccaatcccagacacaccctgcttggtgggcgaggaggaatggaccactgctgct
gttcctcagaccattgtcgatctcttccaaaatgggaactggacgatggagaacccctct
cctgcctgccagtgtagcagtgacaaaataaagaagatgctgcctgtgtgtcctccaggg
gctggagggctgccccctccacaaagaaaacagaatactgcagacatccttcagaacctg
acaggaagaaacatttcagattacttggtgaagacatatgttcagatcattgctaaaagc
ttaaagaataagatctgggtgaatgagtttaggtatggagggttttccctgggtgtcagt
aattctcaagcacttcctccaagtcaagaagttaaggatgccatcaaacaagtgaagaaa
cacttgaggctggccaaagacagttctgcagatcgatttctcagcagcttgggaaggttc
atgacaggtctggataccaaaaacaatgtcaaggtgtggttcaataacaagggctggcat
gccatcagctctttcctgaatgtcatcaacaatgctattctccgggctaacctgcagaag
ggagagaatcctagccagtatggaatcactgctttcaatcaccccctgaatctcaccaaa
cagcagctctcagaggtggctttgatgaccacatcggtggatgtccttgtgtccatctgt
gtcatctttgcgatgtcttttgtcccagccagctttgttgtgttcctaattcaggaacgg
gtcagcaaagcaaagcatctgcagttcatcagtggggtgaagcctgtcatttactggctc
tccaattttgtctgggatatgtgcaattatgtggtccctgctacactggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgttagccctt
ctacttttgctatatgggtggtccatcacacctctcatgtacccagcttcctttgtgttc
aagatccccagcacagcctatgtagtactcaccagtgtgaatctcttcatcggcatcaat
ggcagtgtggccacttttgtgctggagctcttcaccaacaacaagctgaataacatcaac
gacatcttgaagtctgtgttcctgatcttcccccacttctgcctggggagagggctcatt
gacatggtgaaaaaccaggcaatggctgatgctctggaaagatttggagaagatcgcttt
gtgtcaccactctcttgggatttggtggggcggaaccttttcgccatggccgtggaagga
gtggtgtttttcctcattactgttctgatccagtacagattcttcatcaggcccagacct
gtgaaggcaaagctccctcctctgaatgatgaggatgatgatgtaaggcgggaaagacag
agaatcctggatggtggaggacagaatgacattttggaaatcaaggaactaactaagata
tacagaaggaagaggaagccagctgttgataggatttgtgttggcattcctcctggagag
tgctttggactcctgggagtgaatggtgctgggaaatcatcaactttcaagatgttaact
ggagacaccactgtaaccagaggtgatgcttttcttaacaaaaacagcatcttatcaagt
atccacgaagtacatcagaacatgggctactgccctcagttcgatgccatcacagagctg
ctgactgggagagaacacgtggagttctttgctctcttgagaggagtcccagagaaagaa
gttggcaaggttggtgagtgggcaattcggaaactgggcctcgtgaagtatggggagaag
tacgctggcaactacagtggaggcaacaagaggaaactttctacagccatggctttgatt
ggtggccccccggtggtgtttctggatgagccaactacaggtatggatcccaaagcccga
agattcttatggaattgtgccctgagcatcgtcaaagaggggaggtcggtggtgctgacg
tctcacagcatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
aggttcaggtgccttggcagtgtccaacatctgaaaaatagatttggagatggttatact
atagttgtacgaatagcaggggccaaccctgacctgaagcctgtccaggaattcttcgga
cttgcctttccaggaagtgtcctaaaggagaaacaccggaacatgctccagtaccagctt
ccatcctcattatcttctctggctaagatattcagtatcctctcccagagcaaaaagcga
ctccacatagaagactactctgtttcccagacaacacttgaccaagtattcgtgaacttt
gccaaggaccaaagtgatgacgaccacttaaaggacctatcattgcacaaaaaccagaca
gtggtggatatggccgtgctcacgtctttcctgcaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
