Dipodomys ordii (Ord's kangaroo rat): 105990842 Help Entry 105990842         CDS       T07834                                  Symbol Col15a1 Name (RefSeq) collagen alpha-1(XV) chain   KO K08135   collagen type XV alpha Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:dord00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     105990842 (Col15a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:dord00535]     105990842 (Col15a1) Proteoglycans [BR:dord00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    105990842 (Col15a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer Laminin_G_3 Motif Other DBs NCBI-GeneID:  105990842 NCBI-ProteinID:  XP_012878813 UniProt:  A0A1S3FQH7 LinkDB All DBs Position Unknown AA seq 1335 aa AA seqDB search MAPRRNAQCWRLLWPLLSVSALLSTLTRTRASAELPSQGHLDLTELIGVPLPSAVSFVTG YGGFPAYSFGPGANVGRPARTLIPPTFFRDFAISAAVKPSSAQGGVLFAITDAFQKVIYL GLRLSGVEDGRQRIILYYTEPGSHVSQEAAAFSVPVMTSKWNRFSLIVQDEEVTLLMDCE EHSHVLFQRSSQSLTFEPSAGVFVGNAGATGLERFTGSIQQLIIYTDPRTPEELCEAHES SASGEASGSQEMDTVAEILEAITYTQAPPEEANVEPLNIPPTSSPFEDTELSGEPMPEGT PETNMSIITPHSIPEQGSGEILNDTLEGVHPVDGDPIPDMGSGSGAFLDATEEQGSTATT EKEAMVSVTNAQAAEVSNVSTGILAMSTQNPGEVASPVPESEEGVATTAAAGGTEASIST AGEAEAGSMPTRGLALSMITPSPEEQTTLVPGGEVGLTTAATSPKVPLSTVEEEEASGDP TDGPTAFTLPPTPGQTFTSAPVDGDMATASTEKTEEEGSGGMSPPGPLLPTPTVAPERQV TMVPGLGSEGSGLGWGLDAGSGSGDLVGSEDLLRGPPGPPGPPGSPGIPGKPGTDVVMGP PGSPGEDGAAGEPGPPGPKGQPGPDGDSGKPGMKGEKGARGPNGSVGEKGDPGSRGLPGP PGKNGQAGTPGVMGPPGPPGPPGPPGPGCTTGLEDIEGSGSIRLLNEPRLFGPTASSGLK GEKGDQGPKGERGMDGTSTVGPPGPRGPPGSIEVLHSSLINITNGSMNFSDIPELMGPPG PDGLPGLPGFPGPRGPKGDTGVPGFPGLKGEQGEKGEPGAILTGDIPLERVKGQKGEPGM HGAPGQMGPKGPPGHKGEFGLPGRPGRPGLNGLKGAKGDSGVIRPGPPGPPGPPGPPGPP GAVVNIKGAVFPVPARPHCKTPVDATHPGDPELVTFHGVKGEKGSWGIPGSKGEKGDQGA QGPPGPPVDPTYLRHFLNSMREENGDRGIRGDPNGNFFVSGPPGLPGNPGLIGQKGEAVV GPQGPPGTPGLPGPPGFGRPGAPGPPGPPGPPGPPAILGSAVALPGPPGPPGEPGLPGPR NLISAFANMDDMLQTAHLVIEGTFIYLRDSSEVFVRVRDGWKKLQLGELIRVPVNSLPPP ALSSSPYHPPPPVSPISGNYERPALHLVALNMPYSGDIRADFLCFKQARAAGLMSTFRAF LSSHLQDLSTVVRKAERYSLPIVNLKGQVLFNNWDSIFSGNGGQFNTHIPIYSFDGRDVM TDPSWPQKVVWHGSNTHGVRLEDKYCEAWRTADMAVTGLASSLSSGKILDQRAYSCANKL IVLCIENSLMTDARK NT seq 4008 nt NT seq  +upstreamnt  +downstreamnt atggcacccaggaggaacgcgcagtgctggcgcctactgtggccgctgctctccgtctcc gcgctcctgtccactctcacccggacacgcgcctcggcagagctgccctcccagggccac ctggacctcacagagctcattggtgtcccactcccctccgctgtgtcctttgtcactggc tatggtggtttcccagcctacagctttgggcctggtgccaatgtgggtcgtccagccagg accctcatcccacccaccttcttcagggactttgccatcagcgcggcggtgaagcccagc agtgcccaaggcggtgtgctctttgccatcactgatgccttccagaaggtcatctacctg ggcctgaggctctcaggtgtggaagacggccgccagcggatcatcctgtactacacagag cctggctcccacgtgtctcaggaggcggctgcgttctcggtgcccgtgatgaccagcaag tggaaccgcttttccctgattgtccaggacgaggaagtgaccctcctcatggactgtgaa gagcacagtcatgtgcttttccagcggtcctctcagtctctgactttcgagcccagtgca ggggtctttgtgggcaatgcaggggccacgggactggaaagattcactggctccatacaa cagctcatcatctacactgaccccaggacacctgaggagctgtgtgaagcccatgagtca tcggcatcaggagaggccagtggatctcaggagatggacacagtggctgagatcctagag gccatcacctacactcaagctccgcctgaagaagcaaatgttgaacccctaaacatacct ccaacttcctctccctttgaggacacggagctttctggtgaacccatgccagaggggacc ccagaaaccaacatgagcatcatcactccacacagcatccctgagcaagggtctggggag atcctgaatgacacactagagggggttcaccctgtggatggtgaccctattcctgacatg ggctcagggagtggggccttccttgatgccactgaggagcagggatcaacagccactaca gaaaaggaagctatggtatctgtcaccaatgcccaagcagcagaggttagcaatgtgtcc actgggatcctggccatgtccacccagaacccaggagaagtggccagtccagttccagag agtgaagaaggtgtagcaacaacagcagcagcaggtgggaccgaggcatccatcagcact gcaggggaagcagaggctggcagcatgcctactagagggctggctctgtccatgatcacc ccgagccctgaggaacagaccactctggttccaggtggtgaggtaggtttaacaacagct gcaacctcaccaaaagtaccactcagcaccgtggaggaagaagaagctagtggggacccc acggatggcccgactgccttcacactcccacccacccctggacaaacattcacctctgca cctgttgatggagacatggccacagcttccacagagaagactgaggaggaggggtcaggt ggcatgtccccccctgggccactgctccccactcccacggtggctcctgagagacaagtc actatggtgccaggcttgggttctgagggctcgggcctgggctggggactggacgctggc tcaggctccggggacctggtgggcagtgaggacctgttaaggggtcctcctggtccccca ggcccacctggctcaccggggattccaggaaaaccaggaacagatgttgtcatgggccct cctggttctcctggggaggatggagctgctggtgaacctgggcccccgggccctaaggga cagcctggacctgacggagactccggcaagcctgggatgaaaggagagaagggtgcaaga gggccaaatggctcagttggtgaaaagggtgaccctggaagccgaggtttaccaggacct ccagggaaaaatggacaagctggcactcctggagtcatgggacctccaggacctcctgga ccccctggtccccccggccctggatgtacaacaggacttgaggatattgaaggctcagga agtatcaggctactgaatgaacccagactctttgggccaacagcctcaagtggtctcaaa ggagagaaaggagatcagggacccaagggtgaaagggggatggatggaaccagcacagtt ggacctcctgggccccggggcccgcctgggagcatcgaggtactgcacagttctctgatc aatatcaccaatggatccatgaacttctcggacattcctgagctcatggggcctccggga cctgatggtttgcctgggctgccaggatttcctggccctagaggaccaaaaggtgatact ggcgtgcctggatttccaggactgaaaggagaacagggcgagaagggggagcctggtgct atcttgaccggggacattcctttggaaagagtgaaggggcaaaagggtgaacctggaatg catggagccccgggacaaatgggtcccaaaggaccaccaggacacaaaggagaatttggc cttccgggaagacccggccgcccaggactgaatggcctcaaaggtgctaaaggagatagt ggagtcatcagacctggcccaccgggtccccctggccctccaggcccccctggacctcct ggagcagtggttaacatcaaaggtgctgttttcccagtacctgcccggccgcactgcaaa acacctgtggatgccactcatcctggggacccagagctcgtcaccttccatggtgttaaa ggagaaaaaggatcctggggcattcctggctcaaagggagagaaaggagaccaaggagcc caaggacctccaggtcctccagtggatccaacttacttgagacattttctgaacagcatg agggaggagaatggagacagggggatcagaggagatcctaatggcaacttctttgtatct gggcctccaggcctgccaggaaacccaggtttgattggtcagaaaggagaggctgttgtt gggccccaaggacccccagggactcctggccttcccggaccacctggctttggaagacct ggtgcccctgggccacctggacctcctgggccaccaggacctccagctatcctgggctca gctgtggcccttccaggcccacccggccctccaggagaaccagggcttcctggacccaga aacttgatctcagcatttgccaacatggatgatatgctacagacagcacatctggtcata gaaggaacattcatctacctgagggacagctctgaggtttttgttcgtgtccgagatggt tggaaaaagttacagctaggagagctgatccgggttcctgtcaatagcctcccaccacct gcactttccagcagtccatatcaccccccgcctcctgtgagccctataagtggcaattat gagagacctgctctgcacctggttgctctgaacatgccatattctggggatatccgagct gattttctgtgcttcaagcaggccagggctgcaggactgatgtctaccttccgagcattt ttatcttcccatttgcaagatctgtccacagtggtgaggaaggcagagagatacagcctt ccaatagtgaacctcaagggccaagtactttttaacaattgggactccattttttctggc aatggaggtcagttcaatacacacattccaatatactcctttgatggccgagatgtgatg acagatccttcttggccccagaaggtggtttggcatggctccaacacacacggtgtccgt cttgaggataaatactgtgaagcatggcgaactgcagacatggcagtcacaggactggcc tcatcactaagctcggggaagattctggaccagagggcatacagctgtgctaataagcta atcgttctgtgtatcgaaaacagtttgatgactgacgctaggaagtaa

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