KEGG   Dipodomys ordii (Ord's kangaroo rat): 105990849
Entry
105990849         CDS       T07834                                 
Symbol
Cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015  mRNA surveillance pathway
dord05164  Influenza A
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105990849 (Cpsf4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    105990849 (Cpsf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dord03021]
    105990849 (Cpsf4)
   03019 Messenger RNA biogenesis [BR:dord03019]
    105990849 (Cpsf4)
Transcription machinery [BR:dord03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105990849 (Cpsf4)
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105990849 (Cpsf4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCHC zf-CCCH_12 zf-CCCH_4 zf-CCCH_3 zf-CCCH_DUS3L zf-CCCH_RBM22 zf-CCHC_3 Nab2-like_zf-CCCH_ zf-C3H1
Other DBs
NCBI-GeneID: 105990849
NCBI-ProteinID: XP_012878820
Ensembl: ENSDORG00000000742
UniProt: A0A1S3FR32
LinkDB
Position
Unknown
AA seq 220 aa
MGWGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE
CPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPLCKFMHPRF
ELPMGTTEQPPLPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQN
SSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 663 nt   +upstreamnt  +downstreamnt
atgggctggggtatgtgcccattccgccacatcagcggtgagaagacagtggtgtgcaag
cactggctgcgagggctgtgcaagaaaggggaccagtgtgagttcttgcatgagtatgac
atgaccaagatgccggagtgctacttctactccaagtttggggaatgcagcaacaaggag
tgtcccttcctgcacattgaccctgagtccaagattaaggactgcccttggtacgaccgt
ggcttctgcaagcatggtcccctgtgcaggcaccggcacacacggagagtcatctgcgta
aattacctcgtgggattctgcccggagggacccttgtgtaaattcatgcaccctcgattt
gaactgcccatgggaaccactgagcagcccccactgccacagcagacgcagccaccgaca
aagcaaagtaacaatccgccattacaaaggtcgtcctccctgatccagttaacgagtcag
aactcttctcccaatcagcagagagccccgcaggtcatcggggtcatgcagagtcagaac
agcagtgcaggcaaccggggaccccggccgctggagcaggtcacctgttacaagtgtggt
gaaaaaggacactatgccaacagatgcaccaaagggcacttggcctttctcagtggacag
tga

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