Dipodomys ordii (Ord's kangaroo rat): 105991030
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Entry
105991030 CDS
T07834
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dord03009
]
105991030
Enzymes [BR:
dord01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
105991030
Ribosome biogenesis [BR:
dord03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105991030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Filament
Snapin_Pallidin
DUF5917
Motif
Other DBs
NCBI-GeneID:
105991030
NCBI-ProteinID:
XP_012879043
UniProt:
A0A1S3FR60
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MGAVGLSSQKGAQALLSTARGKKRPAPAHSSEEEEEDEEEEEEGAEVKQDDLWGSEDSDA
DMVDDYGADSHSEDEDEEEKLLPIERAARRQKALEAAAGGQWSEEDSEEEEAPSPEPREP
GEAEGDLQINVDQDEPFVLPPAGDTEQDAQAPDLQPQLMKNTGVILANDANAERLKSVVG
NLHRLGVTNAIVSHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRC
AHLQKELLLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFG
QEGFTRFRERRFHPSLRAARRFYPHAHNMDGFFIAKLKKFSNAVPQAPAPAPAPAGTRAA
DPPAEPDRPAPQSRSPPAKEARAAAKLPGTIWSFSQPRRLGPGLEPALVQGPGLAWEHPD
GVGVQIDTITPEIRALYNVLAKVKRERDEYKRRWEEEYTVRVQLQERVNELQEEAQEADA
CQEELAMKVEQLKAELVIFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDLAQ
QRNCTDMIHMLQVGWWGMFQKLSPLELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRR
LITQSGDRKSPAFGAVAPSEPPPASEAEDSDRDLSSDSSLR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgttgggctctccagtcagaagggagcccaggccttgttgagcactgctcgg
ggcaagaagcgcccggcacctgcacacagcagtgaggaggaggaggaggatgaagaggag
gaggaggagggtgctgaggtgaagcaggatgacctgtggggctcggaagacagcgatgct
gacatggtggatgactatggcgccgactcgcactccgaggacgaggacgaggaggagaag
ttgttgcccattgagcgagcagcccggaggcagaaggcgctggaggccgcggcgggaggc
cagtggagcgaggaggactctgaggaagaggaggcgccgtccccggagccccgcgaaccc
ggagaggctgagggggacctgcagatcaacgtggaccaggacgagcccttcgtgctgccc
cctgctggcgacacggagcaggatgcccaggcccccgacctgcagccccagctgatgaag
aacacgggcgtcatcctcgccaacgacgccaacgccgagcgcctcaagagcgtggtgggg
aacctgcaccgcctcggggtcaccaacgccatcgtcagccactacgacgggcgccagttc
cccaaggtggtggggggcttcgaccgcgtgctgctggacgcgccctgcagcggcacgggc
gtcatctccaaggaccccgccgtgaagaccaacaaggacgagaaggacatcctgcgctgc
gcgcacctgcagaaggagctgctcctgagcgccatcgactccgtcaacgccgcctccaag
acgggcggctacctggtctactgcacctgctccatcacggtggaggagaacgagtgggtg
gtggactacgccctgaagaagcggaacgtgcgcctggtgcccaccggcctggacttcggc
caggagggcttcacgcgcttccgcgagcgccgcttccacccgagcctgcgcgccgcccgc
cgcttctacccgcatgcgcacaacatggacggcttcttcatcgccaagctcaagaagttc
tccaacgccgtcccccaggccccggccccggccccggccccggcagggactcgtgcagcc
gacccccctgcggagccggaccgccccgcgccccagagccgcagcccgcccgccaaggaa
gccagggcggccgcgaagctgcccggcaccatctggtccttctcgcagccccgccgcctc
ggcccgggcctggagcccgcgctcgtgcagggccccgggctggcgtgggagcaccccgac
ggggtgggcgtgcagatcgacaccatcacccccgagatccgcgcgctctacaacgtgctg
gccaaggtgaagcgcgagcgcgacgagtacaagcgcaggtgggaagaggaatacacggtg
cgggtccagctgcaggagcgcgtgaacgagctgcaggaggaagcccaggaggccgatgcc
tgccaggaagagctggccatgaaggtggagcagttaaaagctgagttggtgatcttcaag
ggactcatgagtaataacctgagcgagctggacaccaagatccaggagaaggccatgaag
gtggacatggacatctgccgccgcatcgacatcactgccaagctctgcgacctggcgcag
cagcgcaactgcaccgacatgatccacatgctgcaggtgggctggtggggaatgttccag
aagctgtccccactggagctggccacggccaagaacgacatgaaccggcacctgcacgag
tacatggagatgtgcagcatgaagcgcggcctggacgtgcagatggagacctgccgccgc
ctcatcacgcagtcgggggaccgaaagtctcctgcgttcggtgcggtcgcgcctagcgag
ccgccgcctgcgagcgaggcggaggactccgatcgagacctgtcatctgacagctccctg
agatag
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