Dipodomys ordii (Ord's kangaroo rat): 105991274 Help Entry 105991274         CDS       T07834                                  Symbol Htt Name (RefSeq) huntingtin   KO K04533   huntingtin Organism dord  Dipodomys ordii (Ord's kangaroo rat) Pathway dord05016   Huntington disease dord05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:dord00001]  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     105991274 (Htt)    05022 Pathways of neurodegeneration - multiple diseases     105991274 (Htt)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dord03019]     105991274 (Htt)    04131 Membrane trafficking [BR:dord04131]     105991274 (Htt)    03029 Mitochondrial biogenesis [BR:dord03029]     105991274 (Htt) Messenger RNA biogenesis [BR:dord03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      105991274 (Htt) Membrane trafficking [BR:dord04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     105991274 (Htt) Mitochondrial biogenesis [BR:dord03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     105991274 (Htt) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_EZ HEAT_EF3_N Rad26-like_helical_rpts Motif Other DBs NCBI-GeneID:  105991274 NCBI-ProteinID:  XP_012879339 Ensembl:  ENSDORG00000003272 UniProt:  A0A1S3FTI8 LinkDB All DBs Position Unknown AA seq 2951 aa AA seqDB search MATLEKLMKAFESLKSFQQQQQKKELAATKKDRVNHCLTICENIVAQSLRNSPEFQKLLG IAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAA LWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMASFGNFANDN EIKVLLKAFIANLKSNSPTVRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEEEH STLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQ HQDHNVVTGALELLQQLFRTPPPELLQALTMPGGLGQLAAAQEEAQGRDRSGSIVELLAG GGSSCSPILSRKQKGKILLGEEEALEDDSESRSDVSSAAFAASVKGEIGGELAASPGVST PGSVGHDIITEQPRSQHTLQADSVDLSGCDLTSAATDGDEEDILSHSSSQISAVPSDPAL DLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADNQCPSMQLGQPQEDEGAEC VLPGGDSSAFRNSSLALQKVQLLESMGHSRQLSDSSVDKFVSRDEAPEPGDTDTKPCRIK GDIGHSTDDDSAPLVHCVRLLSASFLLTGKKNALVPDRDVRVSVKALALSCVGAAVALHP ESFFSRLYKAPLAPMEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSILSRSRFQV GDWLGTIRVLTGNRFSLADCIPLLRKTLKDESSVTCKLACTAVRHCVMSLCSSSYSDLGL QLLIDVLSLRNSPYWLLRTELLETLAEIDFRLVSFLEAKAESLHRGAHHYTGLLKLQERV LNNVVIYLLGDEDPRVRHVAAASLVRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMH ETQPPSHFSVSTITRIYRGYSLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCE ALCLLSAAFPVCVWSLGWHCGAPPLSAPDDSRKSCTVGMATMILTLLSSAWFPLDLSAHQ DALVLAGNLLAASAPKSLRSSWTSEEEANPTATRQEEVWPALGDRTLVPMVEQLFSHLLK VINICAHVLDDVTPGPAIKAALPSLANPPSLSPIRRKGKEREPEQVSVPPSPKKGNEANT ASRQSDSSGPVTASKSSSVGSFYHLPSYLRLHDVLKATHANYKVTLDLQNSTEKFGGFLR SALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQF DSLSWNPSKSQGRAQRLGSSSMRPGLYHYCFMAPYTHFTQALADASLRNMVQVEQEHDAS GWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQV LDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYER YHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQK EVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDRWKRLSRQVADIILPMLAKQQMHIDSH EALGVLNTLFEILAPSSLRPVDMLLRSMFVTPSTMASVSTVQLWISGILAILRVLISQST EDIVLSRIQELSFSPYLISCPVINRLRDGDSSSTMGEHTERKQVKCLPEEIFSRFLLQLA GVLLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATKLFSSDSG EGSFYTLESLNTRVRSMVPTHPALVLLWCQILLLVNHTDHCWWAEVQQTPKRHSLSCTKP LSPQMSDEEDSDSAAQLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLIS LSHEPPVQDFISAIHRNSAASGLFIQAIQSRCENLSTPTTLKNTLQCLEGIHLSQSGAVL TLYVDRLLGTPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEHLQSSGLA QRHQRLYSLLDRFRLSTVQDSLSPLPPVTSHPLDGDGYMPLETVIPDKDWYLRLVRSQCW TKSDSALLEGAELVNRIPAEDMSVFMMSSALAWHLVHEQIPLSLDLQAGLDCCCLALQAP GLCSMISSAEFVTHVCSLIHCVRFLLEAIVVQPGDQLLSPESRLNTPTTVREEKVDSDTQ NPRCVAVACEMVAEMVESLQSVLALGHKRNGSVPAFLTAVLKNIVISLARLPLVNSYTRV PPLVWKLGWSPKPGGDFGTVFPEIPVEFLQEKEIFKEFIYRINTLGWTSRTQFEETWATL LGVLVTQPLVLEQEESPPEEDMERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQP RNKPLKALDTRFGRKLSVIRGVVEQEIQAMVSRRENIATHHPYQAWDPVPSLSPATTGAL ISHDKLLLQTNPERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEADIPAPAS PPVSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVILISEVVRSLLVVSDLF TERTQFEMMYLTLTELRRVHPSEDEILVQYLVPATCKAAAVLGMDKAVAEPVSRLLESTL RSSHLPSQIGALHGVLYVLECDLLDDTAKQLIPVVSDYLLSNLKGAAHCVNVHSQQHVLV MCATAFYLIENYPLDVGPEFSASIIQMCGVMLTGSEDSTPSTIYHCALRGLERLLLSEQL SRLDTESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKASPGRASDPSPAAPDSESV IVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSSQQPYPQF MATVVHKVFQTLHSAGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSFWVSA ILPHLISRMGKLEQVDVNLFCLVATDFYRHQIEEEFDRRAFQSVFEVVATPGGPYHRLLT CLRNVHKVTAC NT seq 8856 nt NT seq  +upstreamnt  +downstreamnt atggcgaccctggagaagctgatgaaggccttcgaatccctcaagtcgttccagcagcag cagcaaaagaaggaacttgcagccaccaaaaaagaccgggtgaatcattgtctgacaata tgtgaaaacatagtggcacaatctctcagaaattctccagaatttcagaaacttctcggt atcgctatggaactttttctgctgtgtagtgatgatgcggagtcagatgtcaggatggtg gctgatgaatgcctcaacaaagttataaaagctttgatggattctaatctgccaaggcta cagttagaactctataaggaaattaaaaagaatggggcccctcgaagtctgcgtgctgcc ctttggaggtttgctgagctggctcacctggttcgacctcagaaatgcaggccttacctg gtgaatctcctgccatgcttaactcgaacaagcaagagacccgaggaatcggtccaggag accttggctgcagctattcccaaaattatggcttcttttggcaattttgcaaatgacaat gaaattaaggtcctgttaaaggctttcatagcaaatctgaaatcaaattcccccactgtc cgtcgcaccgcagctggctctgcagtgagtatctgccagcactccaggaggactcagtac ttctacagctggcttctgaatgtgctcctaggtctgctggtacctgtggaggaagagcac tccacactcctgatcctcggcgtgctgctcacattgaggtatctggtgcctttactacag cagcaggtcaaggacacaagcctgaaaggcagctttggggtgacacggaaagaaatggaa gtctctccttctgctgagcagcttgttcaggtgtatgaactgactttgcatcacacgcaa caccaagaccacaatgtggtgacaggagcactggagctcctacagcagctcttccgcacc ccaccgccggagctgctgcaggcactgaccatgccaggtgggcttggacagctagctgca gctcaagaggaggcccagggccgagaccgcagtgggagcattgtggaacttctagccgga gggggttcttcatgcagccctatcctttcaaggaagcaaaaaggtaaaatactgttagga gaagaagaagccctggaagacgactcagaatcaagatctgacgtcagcagcgcagccttt gcagcctcagtgaagggtgagatcggtggagagctggctgcctctccgggggtctccact cctgggtctgtgggtcatgacatcattacggagcagcctcgttcacagcacacgctgcag gcagactctgtggacctctctggctgtgacttgactagtgctgccaccgatggagatgag gaggacatcttgagccacagctccagccagatcagtgcagttccatctgaccctgctctg gacctaaatgatgggacccaggcctcctcacctatcagtgacagctcccagaccactact gaagggcctgactcggccgtgacaccctccgacagttctgaaattgtgttagatggtgct gacaaccagtgccccagcatgcagctcggccagccacaggaggacgagggagctgaatgt gttcttcctggtggagactcgagtgctttcagaaactcctccctggcacttcagaaggta cagttattggagagcatgggtcacagcaggcagctttctgacagcagtgttgataaattt gtgtcaagagatgaagcgcctgaaccaggcgacacagacaccaagccttgccgaatcaaa ggtgatatcggacactctaccgatgatgattctgctcctctggtccattgtgttcgcctt ttatcggcatcatttttgttaactgggaaaaagaatgccctggttccagacagagacgtg agggtcagtgttaaggctctggccctcagctgtgttggagcagccgtggcccttcatccg gagtcttttttcagcagactttataaagcaccccttgctcccatggagtaccctgaggag cagtatgtctcagacatcttgaactatattgatcatggagacccacaggtcagaggagcc acggccattctctgtgggacactcatctgctccatcctcagccgctcccgcttccaggtg ggggactggcttggcaccatcagagttctaacaggaaatagattttctttggcagactgc attcctttgctgaggaaaactttgaaggatgagtcttctgttacctgtaagctggcctgt acagctgtgaggcactgtgtcatgagtctctgcagcagcagctacagtgacctgggatta cagctgctcattgatgtgctgtctctgaggaatagcccctactggctgctgaggacagag ctgttggagactcttgctgagatcgacttcaggctggtgagctttttggaggcaaaagca gaaagcttgcacagaggggctcatcattacacagggcttttaaaactgcaagaacgagtc ctcaataatgtggtcatctatttgcttggggatgaagaccccagggtgcgacatgttgct gcagcttcattagtaaggttggttccaaagctgttttataaatgtgaccaaggacaggca gatcccgtagtggctgtggcaagagatcaaagtagtgtttacctgaagctgctcatgcac gagacgcagcctccgtcgcacttctccgtcagcaccattaccagaatatatagaggttat agcttactaccaagcataacagatgtcaccatggaaaataacctgtcaagagttattgct gcagtttctcatgagctgatcacatcaaccactagggcactcacatttggatgctgtgaa gctttgtgtcttctttctgcagcttttccagtttgtgtctggagtttaggttggcattgt ggagcgcccccactcagtgcccccgacgactctaggaaaagctgtaccgtggggatggcc accatgattctcaccttgctctcgtcagcgtggttcccattggatctctcagcccatcaa gacgccttggttttggctggaaacttgcttgcagccagtgcccccaagtctctgagaagt tcatggacctctgaagaagaagccaacccaacagccaccagacaagaggaggtgtggcca gctttaggtgaccggacactggtgcccatggtcgagcagctcttctcccacctgctgaag gtgatcaatatctgtgctcacgtcttggatgatgtgactccggggccagcaattaaggca gccttgccttctctagcaaaccccccttccctaagtcccatccggcgaaaggggaaggag agagaaccagaacaggtatctgttccacccagtcccaagaaaggcaatgaggccaataca gcctctcgacaatcagattcctcaggccctgtcacagcaagtaaatcttcctcagtgggc agtttctaccatctcccatcctacctcagactgcatgatgtcctgaaggccactcacgcc aactacaaggtcactttggatcttcagaacagcactgagaagtttggggggttcctgcgc tctgccttggacgttctttctcagattctagagctggcgacactgcaggacattgggaag tgtgttgaagagatccttggttacctgaaatcctgttttagtcgagagccaatgatggca acggtttgcgttcagcagctactgaagacgctctttggaacaaacttggcttcccagttt gacagcttatcttggaaccccagcaagtctcaaggccgagcccagcgcctgggctcttcg agtatgagaccaggcttgtatcactactgcttcatggctccatacacccactttacacaa gccctggcagatgccagcctgaggaacatggtgcaggtggagcaggagcatgacgcctcg ggatggtttgatgtactccagaaagtgtccacccaattgaagactaacctcacaagcgtc acaaagaatcgagctgataagaacgctattcacaaccatattcgtttatttgaacccctt gttataaaagctttaaaacagtacaccactacaacatctgtgcagttgcagaagcaggtt ttggatttgctggcacagctggttcagctacgggtcaattactgtctcctggattcagat caggtgttcattggatttgtgttgaaacaatttgaatacatcgaagtaggccaattcagg gaatcagaggcaattattccaaacatctttttcttcctggtattactatcttatgagcgt taccattcaaaacagatcatcgggattcctaagatcattcagctgtgcgacggcatcatg gccagtgggaggaaggctgtgacacatgccataccagctctgcagcccatagttcatgac ctctttgtgttaaggggaacaaataaggctgatgcaggcaaagagcttgaaacccagaag gaagtggtggtgtcgatgttgttgagactcatccagtaccatcaggtgctggagatgttc atccttgtcctgcagcagtgccacaaagagagtgaggaccggtggaagcgcctctcccgg caggtcgccgacatcatcctgcctatgttagccaagcagcagatgcatattgattctcat gaagcccttggagtgttaaataccttatttgagattttggccccttcctccctccgtcct gtggacatgcttttgcggagtatgtttgtcacgccaagtacaatggcatctgtgagcact gttcaactgtggatatctggaatcctagccattctgagggttctcatttcccagtcaact gaagatattgttctttctcgtattcaggagctctccttctctccctatttaatctcctgt ccggtaatcaaccgtttaagagatggagacagtagctcaacaatgggagaacacactgaa aggaaacaagtgaagtgtttgccagaagaaatattctcaaggtttctgttacagctggct ggtgttcttctagaggacattgttacaaaacaactgaaagtggaaatgagtgaacagcag catactttctactgccaggaattaggcacactgctcatgtgcctcatccacatcttcaag tctggaatgttccggagaataacagcagctgccactaaactcttcagcagcgacagtggt gagggcagcttctacaccctagagagtctgaacacgcgcgtgcgctccatggtgcccacg cacccggccctggtgctcctctggtgccagatcctgctgcttgtcaaccacacagaccac tgctggtgggcagaggtgcaacagactcccaagagacacagtctgtcctgcacaaagccg ctcagcccccagatgtctgacgaggaggattctgactcagcagcccaacttggaatgtgc aacagagagattgtgcgaaggggagccctcattctcttctgtgattatgtctgtcagaat ctccatgactcagagcacctaacgtggctcattgtgaatcacattcaagatctgatcagc ctgtcccatgagcctccagtccaggactttattagtgcaattcatcggaattctgctgcc agtggcctttttatccaggcaatccaatctcgttgtgaaaatctttcaacgccaaccact ctgaagaacacgctgcagtgcttggaaggcattcacctcagccagtcgggcgctgtgctc acactgtatgtggacaggctcctgggcacccccttccgcgcactggctcgcatggttgac accctggcctgccgccgggtagaaatgcttttggctgcaaatttacagagcagcatggcc caattaccagtagaagagctgaacagaatccaggagcacctccagagcagtgggctcgcg cagagacatcaaaggctctattccctgctggacaggttccgactctccactgtgcaagat tccctcagccccctacctccggtcacttcccacccgctggacggggacgggtacatgcca ctggaaacggtgattccagacaaagactggtacctccgtctggtcagatcacaatgttgg accaagtcagattctgcactgctggaaggtgcggagctggtgaatcgcatccctgctgaa gacatgagcgtgttcatgatgagctcggccctggcatggcacttggtccacgagcagatc ccactgagtctggacctccaagcggggctggactgctgctgcctggcactgcaggctcct ggcctctgcagtatgatctcctctgcagagttcgtgacccacgtctgctccctcatccac tgtgtgcgattcctccttgaagctattgtggtacagcctggagaccagctcctcagtcca gaaagcagactgaacactccaactactgtcagagaggagaaggtggactcagacacacaa aaccccaggtgtgtggctgtggcctgtgagatggtggccgagatggtggagtctctgcag tcagttctggccttaggccacaagaggaatggcagcgtgcccgcatttctcacagcggtg ctgaagaacattgtcatcagcctggcccgcctcccccttgtcaacagctacacccgtgtg cccccactggtgtggaaactcggatggtcgcccaaaccaggaggggattttggcaccgtg tttcctgagatccctgtggaattcctccaggagaaggaaatcttcaaagagttcatctac cgcatcaacaccctggggtggactagtcggactcagtttgaagaaacttgggccactctc cttggtgtcctggtgacgcagccgcttgtgctggagcaagaggaaagcccaccggaggaa gacatggagaggacccagatccacgtgctggccgtgcaggccattacctccctggtgctc agtgccatgactgtacctgtggctggcaaccccgctgtgagctgcttggaacaacagccg aggaacaaacccctgaaagcactcgacaccaggtttgggagaaaattgagtgtgatcagg ggggttgtagagcaggagattcaagccatggtttctcggagagaaaacatcgccacccat cacccttaccaggcctgggatccggtcccctccctgtccccagctactacaggtgccctc atcagccacgacaagctgctgctgcagaccaacccggagcgcgagctgggcaacatgagc tacaagctgggccaggtgtccatacactcggtatggctggggaacaacatcacaccattg agagaggaggaatgggatgaggaggaggaggaggaagctgatatccccgcaccagcatct cctcccgtgtctccagtcaactccaggaagcaccgggctggagtcgatatccactcgtgc tcgcagtttttgcttgaattatacagccgatggatcctaccgtccagctctgccagaagg accccggtcatcctcatcagtgaagtggttcgatcgcttctcgtggtctcagacttgttc accgaacgcacccagtttgagatgatgtacctgacgctgacagagctgcggagggtgcac ccttcagaagatgagatccttgttcagtacctggtgcctgccacctgcaaggcagccgct gtgctcggcatggacaaggctgtggcggagccagtcagccgtctgctggagagcacactc aggagcagccacctgcccagccagatcggagccctgcatggcgtcctgtacgtgctggag tgcgacctcctggatgacaccgcgaagcagctcatcccggtcgtcagcgactacctcctg tctaacctcaaaggggcagcccactgcgtgaacgttcacagccagcagcacgtgctggtg atgtgtgccaccgcgttctacctaatcgagaactatcctctagatgtggggccggagttt tctgcatctataatacagatgtgtggagtgatgctgactggcagcgaggactccaccccg tccaccatttaccactgcgccttgcgcggcctggagcgcctcctgctgtcggagcagctc tcccggctggacacagagtccctggtcaagctgagtgtggacagggtgaacgtgcacagc ccgcaccgggccatggcagcgctaggcctgatgctcacctgcatgtacacaggaaaggag aaagccagtccaggcagagcttcggaccccagccctgcagccccggacagtgagtccgtg atcgtcgctatggagcgcgtgtctgttctctttgacaggatcaggaaggggtttccttgt gaagccagggtggtggcaaggatcctgcctcagttcctggacgacttcttcccgccccag gatgtcatgaacaaagtcatcggagagtttctgtccagccaacagccgtacccgcagttc atggccaccgtggtgcacaaggtgttccagactctgcacagcgccggacagtcatcgatg gtccgggattgggtcatgctgtccctgtccaacttcacgcagagaacgcctgtcgccatg gccatgtggagcctctcctgcttttttgtcagcgcgtccaccagcttctgggtttcagcg atccttccgcacctcatcagcaggatgggcaagctggagcaggtggatgtgaaccttttc tgcctggttgccacagacttctacagacaccagatagaggaggagtttgatcgcagggcc ttccagtctgtgtttgaagtggttgccacaccaggaggcccgtatcatcggctacttacg tgcttgcgaaatgtccataaggtcaccgcctgctga

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