Dipodomys ordii (Ord's kangaroo rat): 105991686
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Entry
105991686 CDS
T07834
Symbol
Cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105991686 (Cstf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105991686 (Cstf1)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105991686 (Cstf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_HPS5
VPS8_N
PROPPIN
Beta-prop_WDR75_2nd
Frtz
DUF7099
Motif
Other DBs
NCBI-GeneID:
105991686
NCBI-ProteinID:
XP_012879825
Ensembl:
ENSDORG00000008546
UniProt:
A0A1S3FTX7
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MRSLTKDDAASLAGMEVVFFSKMYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEV
KPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASE
YETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQ
NMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAE
MLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYV
TGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTG
RTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNN
IVRCIVHSPTNPGFMTCSDDFRARFWYRRSTTD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcactaaccaaagatgatgcagctagtctagctggaatggaagttgtctttttc
tccaagatgtatagaaccaaagtgggcctgaaggaccgccagcagctctacaagctgatc
atcagccagctgctctacgatggctacatcagcatcgccaatggcctcatcaatgaagtc
aagcctcagtcagtgtgtgccccctccgagcagctcctgcacctcatcaaactagggatg
gaaaacgatgacacagcagtccagtatgcaattggtcgttcagatacggttgctcctggc
acaggcatagacctggaattcgatgcagatgtccagaccatgtccccagaggcttctgag
tatgaaacgtgctacgtcacatcccataaaggaccctgccgcgtagcaacctacagtaga
gacgggcagctgatagccactgggtctgctgatgcttccataaagatacttgacacagag
agaatgttggccaaaagtgccatgccaatagaggtcatgatgaacgagactgcacagcag
aacatggaaaaccaccccgtgattcggacactctatgaccatgtggatgaagtcacatgt
cttgcttttcacccaacagaacagatcttggcctctggctcaagagattatactctcaaa
ttatttgattattccaaaccatcggcaaaaagagcgttcaagtacattcaggaagctgaa
atgctacgctccatctctttccatccttctggagactttatactggttggaactcagcac
cctactcttcgactttatgatatcaacaccttccaatgctttgtctcttgcaatcctcaa
gatcagcacaccgacgccatttgctccgttaattacaaccccagtgccaatatgtatgta
actggcagcaaggacggctgtatcaaattatgggatggagtttcaaatcgctgcatcacc
acctttgagaaagcacacgacggtgccgaagtctgctctgccattttttccaaaaattct
aaatacattctttcaagtggaaaagactctgtggctaagctttgggaaatatccacagga
cgaacactggtcagatacacgggcgcgggcctgagcggcaggcaggtgcaccggacacag
gccgtctttaaccacacggaggactacgtgctgctaccggatgaaaggaccatcagcctg
tgctgctgggactcgaggacggccgagcgccggaacctgctctcactgggccacaacaac
atcgtgcgctgcatcgtgcactcacccaccaacccgggcttcatgacctgcagcgacgac
ttcagagcccggttctggtaccggaggtctaccaccgactga
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