Dipodomys ordii (Ord's kangaroo rat): 105992044
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Entry
105992044 CDS
T07834
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105992044 (Ddx17)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105992044 (Ddx17)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105992044 (Ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105992044
NCBI-ProteinID:
XP_012880299
Ensembl:
ENSDORG00000003358
UniProt:
A0A1S3FW97
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRASYANGSGY
GSPNSAFGAQAGQYTYSQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSAGRSSQSSSQQF
SAIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgagatcgagatcgtggcggatttggagca
agaggtggtggtggccttcccccgaagaaatttggtaaccctggggagcgcttgcgtaag
aagaagtgggatctgagtgagcttcccaagtttgagaagaacttctatgtagaacaccca
gaagtggccaggctcactccatatgaggttgatgagctacgccgaaagaaggagattaca
gtgagaggtggagatgtttgtcctaaacctgtctttgcctttcatcatgctaatttccca
caatacgtaatggatgtgttgatggatcagcacttcacagaacctactcctatccagtgc
cagggatttccattggctcttagtggccgggatatggtgggcattgctcaaaccggctct
ggcaagacattggcgtatttgctgcctgcaattgttcatattaaccaccagccatacttg
gaaagaggagacggcccaatttgtctagtgctggctcccaccagagagcttgctcagcaa
gtacagcaggtagctgatgactatggcaagtgttccaggttgaagagtacatgcatttat
ggaggtgcgcctaaaggtccccagattcgagatctggaaagaggtgtggagatctgtata
gctactcctggaagactgatagattttctggagtcgggaaagacaaaccttcgccgatgt
acttaccttgtgctggacgaggctgacaggatgcttgatatgggcttcgaaccccagatc
cgtaaaattgttgatcagatcaggcccgatcggcagacactgatgtggagtgcaacatgg
ccaaaggaagtgcgacaacttgctgaggacttcctccgagactacacccagatcaacgtg
ggcaacctggagctgagtgccaaccacaacatccttcagatcgtggatgtctgtatggag
agtgaaaaagaccacaagttgattcaactgatggaggaaataatggctgaaaaggaaaac
aaaacaataatctttgtggagacaaagaggcgctgtgatgacctcactcgcaggatgcgc
agggacggttggcctgctatgtgtatccatggagacaagagtcaaccagaaagagactgg
gtccttaatgagtttcgttctggaaaggctcccattctcattgccacggatgtagcctcc
cgtgggctagacgtggaagatgtcaagtttgtgatcaactatgactatcctaacagctca
gaggattacgtgcaccgcattggccgaacagcccggagcaccaacaagggcactgcgtat
actttcttcaccccagggaacctaaagcaggccagagagctgatcaaagtgctagaagag
gccaatcaggccattaatccaaagctgatgcagctggtggaccacagaggcggcggcggc
ggcgggggaggccgctctcgataccggactacttcttctgccaacaaccccaacctgatg
tatcaggatgagtgtgaccggaggcttcgaggagtgaaagatggtggacggagagactct
gcgagctatcgggatcgcagtgaaaccgatagagccagctatgctaatggcagtggctat
ggaagtccaaattctgcctttggagcccaagcaggccaatatacctacagtcaaggcacc
tatggggcagctgcctatggcaccagtggctatacagcccaggagtacggcgctggcacg
tacggggctagtagcaccacctcagctgggagaagttctcagagctccagccagcagttt
agcgccataggccggtctgggcagcagccgcagcctctgatgtcacaacagtttgcacag
cctccaggagctaccaacatgataggttacatggggcagacggcctaccagtacccgccc
ccgcccccgccccctcccccctcgcggaagtga
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