Dipodomys ordii (Ord's kangaroo rat): 105992063
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Entry
105992063 CDS
T07834
Symbol
Tnrc6b
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105992063 (Tnrc6b)
03036 Chromosome and associated proteins [BR:
dord03036
]
105992063 (Tnrc6b)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105992063 (Tnrc6b)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105992063 (Tnrc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
105992063
NCBI-ProteinID:
XP_012880325
Ensembl:
ENSDORG00000003386
UniProt:
A0A1S3FVC0
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKK
KKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVTGTLL
QSESGTAPESTLGGAAASNYANSTWGPGASSNNGTSPNPIHTWDKVIVDGSDMEEWPCIA
SKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPK
AKSVQSSNSTPESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGTSRKGA
LETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKSGNTNSLNLS
SPNPMENKGMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTVSGQSNSG
NNGNNGKEREDSWKGASVQKSSGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTS
GVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSS
TGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWG
QTQIKQDTVWDIEEVPRLEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELS
ASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDDKTPSSWNENSSKDQGWGGSRQPNQGWTS
GKNGWGEEVDQTKNSNWESTANKPVSGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSP
AWNDTGRQPNSWNKQHQPPQPPQQPPPPQPEASGSWGGPPPPPPGSVRPSNSNWSSGPQP
TAPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGTAPREPN
LPTPMTGKSPSVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDAGASTTGWGNTPASAPN
AMKPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTTGSQGSASSHNSASWGQGGKK
QMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVDKKFDVDKRAMNLGDFN
DIMRKDRSGFRPPNSKDLGTTDSGPYFEKGGNHGLFGNSTAQSRGLHTPVQPLSSSPGLR
AQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLL
LQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQQQQQRPPSMKHSPSHPVGPKP
HLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEG
LPSVATQEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTN
KIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDN
TTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKM
WKNHISSRNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVR
PSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHM
CVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPTAGWQSLETGQNQSDPVGPALNL
FGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDL
LGGGSDSI
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatgaaggagaagtgtcggaagaaagcagttccaaggtggaacaggaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagaaagcaaacaagagaag
gagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataagaag
aaaaaggaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaa
ccaagtttaagccaaccaacggccgccagcccaattggcagctctccatcgccaccagtc
aatggtggcaacaatgccaaaagggtggccgtgccgaacggacagccgccaagcgccgcc
cgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgtta
ctaaaacgtgggcagccccctccaccttcctgcatgctcctcgggggcggggcggggcct
cctccctgcacagcacctggagcaaacccaaacaacgcacaagtgacaggaacgctgctg
cagagcgagagtgggactgcgccagagtcaacccttggaggtgctgctgcttcaaattat
gcaaattccacttggggcccgggagcctcctccaacaacggcacctcccccaacccaatt
cacacctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgcc
agcaaagacactgaatcttcttccgaaaacaccaccgataacaacagtgcctcaaaccct
ggctctgagaagagcactctgccaggaagcaccactagtaacaaaggcaaagggagccag
tgccagtctgcaagttctgggaacgaatgtaatcttggggtttggaaatctgaccctaag
gctaaatctgttcaatcttccaactctactccagagagcaacaatggactaggaaattgg
aggaatgtgagtggtcaggatcgaattggacctggctctggcttcagcaactttaaccca
aatagcaacccatctgcctggccagcactggtccaagaaggaacttctaggaaaggggca
ttggaaacagataccagtaattccagtgcacaggttagcacagtaggtcaggcatccagg
gaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacag
gctcaaattcataacactgatggaccaaaaagtggaaacactaactccttgaacttaagt
tcaccaaaccccatggagaataagggaatgcccttcggaatgggcttggggaacacctcc
aggagcactgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatct
tggggtgcagctaggggtccttctggaactgacacagtctctggacaaagtaattctgga
aacaatgggaacaatggaaaagagagagaggactcctggaaaggagcttctgttcagaaa
tcaagtgggtcaaaaaatgactcttgggacaataataacaggtctacgggtgggtcctgg
aactttggccctcaggactctaatgacaacaaatggggtgaagggaacaaaatgacatct
ggggtctctcagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaa
tggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccac
cccctccctgaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagctcc
acaggaagtgaagttggaggacaaagcactggaagcaaccacaaagcaggaagtagcgac
agtcataattctggccgtcggtcatacaggcctacacatcctgattgccaggctgtcttg
cagactcttttgagccgaactgatttggaccccagggtgctctcaaacactggctggggc
caaactcaaattaagcaggacacagtgtgggatattgaagaggtgccaaggcttgagggg
aaatcggacaaaggaactgaggggtgggagagcgctgccacacagaccaagaactcaggg
ggctggggagatgcacccagccaaagcaatcaaatgaagtctggatggggggagctctca
gcctctacagaatggaaagaccccaagaacacaggaggctggaatgattataagaacaac
aactcttctaactggggaggaggaagaccagatgacaagactccttcctcttggaatgag
aattccagcaaggatcaggggtggggaggaagccgccagcccaatcaagggtggacttct
gggaagaatggttggggagaggaagttgatcaaacgaaaaacagcaattgggaaagtact
gcaaataagcctgtgtctgggtggggtgaaggaggacagaatgaaattggaacttggggg
aatggggggaatgcaagcctagcttcgaaaggtgggtgggaagattgcaaaagatccccc
gcatggaatgacacaggcagacagcccaattcctggaataaacaacaccaaccgccgcag
ccaccacagcagccaccgccaccacaaccagaggcgtctggttcatggggaggaccgccc
ccaccacctccgggcagtgttcgaccttccaattccaactggagcagtgggcctcagccc
acagcccctaaggatgaggaacccagtggttgggaagagccatccccacagtcaattagt
cgaaagatggacattgacgatggcacctcagcatggggagaccctaacagttacaactac
aagaatgtgaacctgtgggataagaattcccaaggtggcacagcacctcgagaaccaaac
ctgcccacccccatgaccggaaaatcaccatcagtctggagcaaaagcacaccacctgct
ccagataatgggacatcagcctggggtgagccgaacgaaagcagtcctgggtggggcgaa
atggatgatgcgggagcatcgaccacagggtgggggaacacacctgccagcgctcccaat
gccatgaaacccaattccaaatctatgcaagatggctggggggagagtgatgggccggtc
acaggaactcgccatcccagctgggaagaagaggacgatggaggagtctggaacaccacc
ggctctcagggaagtgcttcctcccacaactcagcaagctggggacaaggagggaagaag
caaatgaagtgctcactcaaaggaggaaacaatgattcatggatgaatcctctcgccaaa
cagttttcaaatatgggattgctgagtcaaactgaagataatccaagcagcaaaatggat
ttgtctgtagataaaaaatttgatgtggacaagcgagcaatgaatctcggggattttaat
gatatcatgaggaaggatcgatctgggttccgtccacctaattccaaagacttgggaacc
acagacagtgggccttattttgagaagggcggcaatcatggtttatttggaaacagcaca
gcacaatcgaggggtctgcacacaccagtgcagccactgagttcttctcctggtctccgg
gcgcaagtgcctccccagtttatctccccccaggtttctgcctcaatgctcaagcagttt
cccaacagtggcctgaatccaggtcttttcaacgtggggccccagttatctcctcaacaa
attgccatgctgagccagcttccacaaatcccccagttccagttggcttgtcagcttctc
ctgcagcagcagcagcagcagcagttgctacagaaccagagaaagatttctcaagcagtg
cgccagcagcaagaacagcagctggctcgaatggtgagcgcactacagcagcagcaacag
cagcaacagcggccaccaagcatgaagcactcaccctctcatccggttgggcccaagcca
catctggacaacatggtacccaacgcactgaatgtggggctaccagaccttcagaccaaa
gggccaatccctggatatggttctggcttcagctctggcggtatggactatggcatggtt
ggtgggaaggaggctgggactgagtctcgtttcaaacagtggacctccatgatggaagga
ctgccctctgtggccacacaggaagccaccatgcacaaaaatggcgctatagtggcccct
ggtaaaacccgaggagggtcaccatacaaccagtttgatatcatcccaggtgacacgctg
ggtggccatacgggtcctgctggtgatagctggttacctgccaaatctccaccaacaaat
aaaattggaagtaaatccagcaatgccagttggcctccagaattccaaccaggagtgcca
tggaaaggtatccaaaatattgaccctgaatctgatccctatgtcaccccaggaagtgtg
ctggggggtacagccacatctcccattgtagatactgaccaccaactgctgcgggataac
accacagggtctaattcttccctcaacacctcgctgccttcacctggtgcctggccctac
agtgcctctgacaactccttcaccaacgttcatagcacttcagcaaagttccctgattac
aaatccacgtggtccccagatcccataggacacaaccccactcatctctccaacaagatg
tggaaaaaccacatctcctccaggaacactacaccgctgccccgcccacctcccggcttg
accaaccccaaaccggcatctccctggagcagcacagcaccccgatccgtcagggggtgg
gggacccaggactctcggcttgcctcagcctctacctggagtgatggtggctcagttcgt
cctagttactggctcgttcttcacaatctcactccacagattgatgggtcaaccttgaga
acgatctgcatgcagcatggtccactgctgacattccatctgaatctaacccagggcact
gccctgatccgatacagcaccaaacaggaggcggccaaggcccaaactgcactgcacatg
tgtgtgttgggaaacactaccatcctggctgagtttgccaccgatgatgaagttagccgc
tttttggcacaagctcagccccctacacctgcagcaacccccagcgcaccaaccgcaggg
tggcagtccctggaaaccggccagaaccagtcagaccctgttggacctgcgctgaacctt
ttcggtgggtctactgggctcgggcagtggagcagcagtgctggcggcagcagtggggcc
gatcttgctggcgcttcgttgtgggggcccccaaactattcttctagcttatggggagtc
ccatcggtagaagatccccataggatgggcagcccggctcctttactacctggtgacctt
ctgggaggagggtcggattcaatctga
DBGET
integrated database retrieval system
