Dipodomys ordii (Ord's kangaroo rat): 105992244
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Entry
105992244 CDS
T07834
Symbol
Sox5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dord03000
]
105992244 (Sox5)
Transcription factors [BR:
dord03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105992244 (Sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Motif
Other DBs
NCBI-GeneID:
105992244
NCBI-ProteinID:
XP_012880521
UniProt:
A0A1S3FVD2
LinkDB
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Position
Unknown
AA seq
757 aa
AA seq
DB search
MSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLSLHVSFPTQPHSEEFQPVPLL
THETGGPRTPTPQHSSMEVDGNKVMSSFTAHNSSTSPQKAEEGGRQSGEPLPSAALGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCISK
LPARICSETKNDLLTDKQLYAAQLAAMQVSPAGKLPGLAQANLGASVSPTSIHTDKSTST
PPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRLNSGAGPLKASVPAPLASPSA
RVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQALDGKVAVVNNLGLNNCRTEKEKTTLE
SLTQQLAAKQSEEGKFSHTIMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNA
FMVWAKDERRKILQAFPDMHNSNISKILGKLPYIACTSSSSDGDFSTSYCQNQSFEKFPS
CFRYIQIRQLILHTLREHRTFDTFQGWQNETTPQFRQKRVVWEKHTADLYQMKLPVILTT
EHQESVLRLSFPKHTVVYSTSNETSQMNPKWNPPTESRPLFGVLQANVERNEIPYMEAIS
PSGYLPPKLQAKLAFWLCCPRISNFDSRYHGLSEPQN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaggcgcccagcctctccgtatggggaagcagatggagaggtagccatggtg
acgagcagacagaaagtagaggaagaggaaagtgatgggcccccagcctttcacctttct
ttacatgtgagttttcccacccagcctcactccgaggaattccagccagtccctctgctg
acccacgagacgggcggcccccgaacacccactcctcagcacagtagcatggaagttgat
ggcaataaagttatgtcttcatttacggcacacaactcatctacctcaccccagaaggca
gaagaaggtgggcgacaaagtggggagcccctgcctagtgctgccctggggacccctgaa
cggcgcaagggtagcttagcggatgtggtagacacattgaagcagaggaaaatggaagag
ctcatcaaaaacgagccagaagagacacctagtatcgaaaagctactctcaaaggactgg
aaagacaagcttcttgcaatgggatcagggaactttggagaaatcaaagggactccggaa
agcctggcggagaaggagcggcagctcatgggtatgatcaaccagctgaccagcctgcgc
gagcagctgctggccgcccacgacgagcagaagaagctcgctgcgtcccagattgagaag
cagcgccagcagatggagcttgccaagcagcagcaagaacagattgccagacagcagcaa
caacttctgcagcagcaacacaaaatcaatttgctccagcaacagattcaggttcaaggt
caattgccgcccttaatgatccccgtgttccctccggatcaaaggactctggctgcagcc
gcccagcaaggattcctcctccctccgggcttcagctacaaggccggatgcatatccaag
cttccagcccggatctgctctgaaaccaagaatgatcttctcacagacaaacagttgtat
gctgcccagctagccgccatgcaagtgtcacctgcagggaagctgcccggcttagcccag
gccaacctcggtgcttctgtatctcctaccagcattcacaccgacaagagcacaagcacc
ccgccgcccaaaagcaaggatgaagtagcacagccactgaacctatccgccaaacccaag
acctccgatggcaagtcgcccacctcgcccacctccccacacatgccagcgctgagacta
aacagcggggcaggccccctcaaagcctcggtccccgctcccctggccagcccttcagcc
agagttagcacaataggttatttaaacgaccacgacgtcgtcaccaaggccatccaagaa
gcgcggcaaatgaaggagcagcttcggcgcgagcagcaggcgctggacgggaaggtggcc
gtggtcaataacctaggcctcaacaactgccggacggagaaggagaaaaccacgctggag
agcctcacccagcagctggcagccaaacagagcgaagaagggaaatttagccatacaatc
atggatttcaatatgagcggagattccgatgggagtgcgggagtctcagagtcaagaatt
taccgggagtcgaggggtcgtggcagcaacgaaccccacatcaagcgtcccatgaatgcc
ttcatggtgtgggcaaaagatgagcgcaggaagatcctgcaggcctttcctgacatgcac
aactccaacatcagcaagatcctaggtaagcttccatacatcgcctgcacctccagctca
tctgatggagatttttccacttcctattgtcagaatcaaagctttgaaaagttcccttcg
tgtttcagatacatccagattcgtcagcttatattgcacactttaagagagcatcggaca
ttcgacactttccaaggttggcaaaatgagaccaccccacagttcaggcagaagagagtt
gtttgggagaagcacacggccgacctgtaccagatgaaacttccagtgatcctgacaacc
gagcatcaggagtcagttctccggctcagcttccccaaacacaccgttgtttattcaact
tcaaatgagaccagccagatgaatccgaagtggaatcctcccacagaatctaggcccttg
tttggcgtgctacaagccaatgttgaacgcaacgaaattccttatatggaagcaatctct
cccagtggctacctccctccaaagctgcaagccaagttagcattctggctctgttgtcct
cgaatctctaactttgactccaggtaccatggcctctcagaacctcaaaattaa
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