Dipodomys ordii (Ord's kangaroo rat): 105992521
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Entry
105992521 CDS
T07834
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03013
Nucleocytoplasmic transport
dord03015
mRNA surveillance pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105992521 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
105992521 (Acin1)
03015 mRNA surveillance pathway
105992521 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105992521 (Acin1)
03041 Spliceosome [BR:
dord03041
]
105992521 (Acin1)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105992521 (Acin1)
Spliceosome [BR:
dord03041
]
Complex C
Other components
EJC/TREX
105992521 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
105992521
NCBI-ProteinID:
XP_012880850
Ensembl:
ENSDORG00000010574
UniProt:
A0A1S3FWT8
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSKNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIQPEGVASLLPPDFQSSLERPELELSRHSPRNSSSFSEEKGESDDEKPRKG
ERRSSRVRQARAAKLSECSQAAEEEEDQETPSRNLRVRADRNLKREDEEEEEEEDDDEEE
EEDDEGQKSREAPVLKQFEEGEKEKPREKREEMMDENLNIRSQEQQEGLERGGRVTRSQE
EARRSHLARQQQEKEVQMAPPLEEDKREIKSSQGLEEKSQSPSPPQLTEDLEKVPVVLQP
EQTASEEETPPPLLTKEASSPPPHVQLQSGEDTEPMEGPAPPVLIQLSPPNTDTESRELL
ISQHTVQLVGGMSPLSKPADTKVESPAEKMSEDSVLPLVQKSIPAEYSAQKFLKTESEKS
AQPLPLTVEELAPAKEITAESPQQQSLEQKESIRVSHTLFPSHRLKQSAESSSSRSSSSS
SSSSRSRSRSPDSSGSQSHSSPQSKQREVSQTGVQANPHGRLKTGSRLTSESRSRSRSRS
ASSSSRKSLSPGVSRDNTSYTETKDPSSVQEIAAPPVPQLQIFEPKERPSTSSSSILMRR
MSQPEPAEKHTTQRLQSEQRSPKKCEAEEAEPPAATQPQTSETQTSNVPESERIHHTVEE
KEEVTMDTSENRPENEVPEPPVPIADQVSNDDRPESSAEDEKKESLLPKSFKRKISVVSA
TKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVD
LHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPP
VPPQVSVEMALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGK
ISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTAL
HGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKAEEQGMPRPLHPPPPPPVQPPP
HTRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERA
KSKEKKSEKKEKTQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKERE
KRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERDRERDRGDRDRDRERD
RERGRERERDRRETKRHSRSRSRSTPVRDRGGRR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgccctg
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacattcgacaccccatgctgcattccagccaaat
tcccagattggggaagaaatgagtaagaacagtttcataaagcagtatctggaaaagcag
caagagctacttaggcagcgtctagaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccagcctgagggagtggcttccctgctgcct
cctgactttcagagcagcctggagagaccagagctggagctcagcagacattcgcccaga
aacagctcctctttttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacgatcttccagggtcagacaggcaagggcagctaaactctctgagtgcagccag
gctgctgaagaagaagaggatcaagaaacaccttctagaaatctgagagtcagggcagat
agaaatttgaaaagagaggatgaagaagaggaggaggaggaagatgatgatgaagaggag
gaggaagatgatgagggacaaaaatctagggaggcaccagttctgaaacagtttgaagaa
ggagagaaagagaaacccagagaaaaacgagaggaaatgatggatgagaatcttaacata
agatcccaagaacagcaggagggtttggagagaggagggcgagttacaagatctcaggaa
gaagctagaagaagtcatctggccagacagcagcaagagaaagaagtgcaaatggctcct
ccccttgaggaggataaaagagaaataaaatcttcacagggcttggaagagaaatcccag
tctccttcccctcctcaactgactgaggatctagagaaggtccctgttgtgctacagcca
gagcaaacagccagtgaagaggagactcctccacctttacttaccaaggaagcatcttct
ccaccacctcatgtacaactccagagtggggaagacactgagcccatggaaggcccagca
cccccagttctcattcagttatctcctcctaatacagacactgagagcagagagttattg
atatctcagcatactgtccagttggtaggaggcatgtctcctttgtcaaaacctgcagac
accaaagtagaatctccagcagagaaaatgtcagaagatagtgtcttgcctctagttcag
aaaagcataccggctgaatactcagcccagaagtttcttaaaactgaatcagaaaaatct
gctcagccactccctctaacagtggaggaattagcaccggccaaagagatcactgcagag
tctccgcagcagcagtctttggaacagaaggagagcataagggtttctcatactcttttc
ccaagccacagattgaagcagtcagccgaatcatcgtctagccggtcctcctcctcttca
tcctccagttctagatccagatcgcgctctcctgacagttcaggctctcagtctcactca
tctccacaatccaagcagagagaagtatcccagacaggagttcaggccaaccctcatggt
agacttaagacaggctcaaggttaacatcagagtccaggtcccgttcccgatcccgttca
gcatcaagcagcagcagaaaatctctgagccctggagtctccagggacaacaccagctac
actgaaaccaaagatccctcttctgttcaagagattgcagctccaccagtgccacagctg
cagatctttgaaccaaaggagaggccttccacctcctcatcctctatcttaatgaggcgt
atgagccagcctgaaccagctgaaaaacatacgacccagagattacagtctgagcagagg
agcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacccagcctcaaacc
tcagagactcagacctctaatgtaccagaatcagaaaggattcatcacactgttgaggag
aaggaggaagtgaccatggacacaagtgaaaatagacctgaaaatgaggttccagagcct
cctgtgcctattgcagaccaagtcagcaatgatgaccgcccagagagcagtgctgaagat
gagaagaaagagagtttgctgcccaaatcattcaagaggaagatctccgttgtctcagct
accaagggagtaccagctggaaacagtgacacagaggggggccagcctggtcgaaagcga
cgttggggagccagcacagccactacccagaagaaaccctccatcagtatcaccactgaa
tcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggat
cttcatgctgatgactctcgcatctctgaggatgaaacggagcgtaatggcgacgatggg
acccatgacaagggactgaaaatatgccggacggtcactcaggtagtacctgcagagggg
caggagaatggacaaagggaagaagaggaagaagagaaggagcctgaagcagaacctcct
gtacctccccaggtgtcagtagagatggctttgcccccacctgtagaacatgaagtgaaa
aaagtcactttaggagataccttaactcggcggtccattagccagcagaagtctggagtt
tccattacaattgatgacccagtccgaactgcccaggtgccctccccacccaggggcaag
atcagtaatattgtgcatatctccaatttggttcgtcccttcactttaggccaactgaag
gagttgttagggcgtacaggaaccttggtggaagaggccttctggattgacaagatcaaa
tctcattgctttgtaacgtattcaactgtagaggaagccgttgccacccgcacagctcta
catggggtcaaatggccccagtccaatcccaaattcctttgtgctgactatgctgagcaa
gatgagctggattatcaccggggcctcttggtggaccgtccctctgaaacaaaggctgag
gaacagggtatgccacgacccctgcacccaccaccaccacccccagtccagccaccaccc
catacgcgggcagagcagcgggagcaagagcgagctgtgcgagaacagtgggcagagcgg
gaacgggaaatggagcggcgagagcgaactcgatcagagcgtgaatgggatcgggacaaa
gttcgagaagggcctcggtccagatcacggtcccgtgaccgccgccgcaaggaacgtgca
aaatctaaagaaaagaagagtgagaaaaaagagaaaacccaggaagagccacctgctaag
ttactggatgaccttttccgtaagactaaggcagctccttgcatctattggctcccattg
actgacagccagattgttcagaaggaagcggagcgcgctgaacgggccaaggagcgggag
aagcggcggaaggaacaagaggaggaagagcaaaaggagcgggagaaggaagcggagcgg
gaacggaaccgacaactggaacgggagaaacggcgggagcacagccgggaaagggacagg
gagcgagaaagagacagggagcgtgaccggggagaccgagatcgggatagggaaagagac
cgggaacgaggcagggagagagagagggatcgcagagaaaccaagcgccacagcagaagc
cggagtcgaagcacacctgttcgggaccgcggcgggcgccgctag
DBGET
integrated database retrieval system
