Dipodomys ordii (Ord's kangaroo rat): 105992672
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Entry
105992672 CDS
T07834
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dord04121
]
105992672 (Zswim8)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
105992672 (Zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
105992672
NCBI-ProteinID:
XP_012881109
Ensembl:
ENSDORG00000005553
UniProt:
A0A1S3FYJ8
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGGGGSRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPPRPGASRSGGLEESRDRPRPLPTDPAV
RPKEPGAKRKGLGEGVSSSQRGPRRLSAEGGDKALHKMGPGGGKTKVLGGPGSGGKGSAG
NGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPPGGSRGPSTFL
PEPPDTYEEDAGVYFSEGPEPPTASVAPPGLLPGRVCARDDLPSTDDSGSGLPKTKEASP
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATANQRSPSKHGAPSAPGALQPLASGSAGPAQPGNMAGTGPG
PTEGYTEKNVPESSPHSPCDGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSCTAR
EGATSCSVSGIRAAGEAGRGLPEGRGGPGTEAVTVAAAAAVTAAATVVPVISVGSSLYPG
PGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPGSAYPQGVHP
AFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSS
VHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLA
LEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPRSCPQPPACPRL
PPTGAALPTGIHAVHPPPLNSPNPRRLRRLRECHPQCSQRLLPDTHGHDAVQRHPAEPQA
QQTDQGVVAAGLSRDDRLFPLSLAPLGFCIGTQAFGSRGLLNRGSEIWLDGSSCLLSSLV
AQTGSCSWTIVWGQDISDPRSLGLGETALSGKGRWVTSGIYLAFINI
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggagagcgtttctcgttcgaggattccgat
cgctttgaagaggattcactctgttccttcatctccgaggccgaaagcctttgccagaac
tggcggggatggcgcaaacagtccgcggggcccaactcccccactggcggcggcggtggc
ggtggcggcggcggcagcagaatgcgagatggactggtgatcccattggtggaactgtca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttaccctccagtg
cctgagcagcttcagctccgaattgctttttggagcttccctgagaatgaagaggacatt
cggttgtattcatgtctagccaatggcagtgcagatgagttccagcgaggcgatcagctg
tttcgcatgagggctgtgaaggacccactacaaatagggttccacctgagtgctacagtg
gtgccaccacagatggtccctcccaaaggggcctacaacgtggctgtgatgtttgaccgc
tgtcgggttacttcctgcagctgtacctgtggggctggggccaaatggtgcacccatgtc
gtggcactctgtctcttccgcatccacaacgcttctgcggtctgcctgcgggccccagtt
tcagagtccctgtctcgattacagcgggaccagctgcagaagtttgctcagtaccttatc
agtgagctccctcagcagatcctccctacagcccagcgtctcctggatgaacttctctcc
tctcagtcaactgcgatcaatacagtgtgtggagccccagaccccactgcgggaccctca
gcttcagaccagagcacttggtatttggatgagtccacactcactgacaacatcaagaag
acactgcacaagttctgtggcccctcccctgtggtctttagtgatgtgaactcaatgtat
ctgtcttccacggagcctccagctgctgcggaatgggcatgtctgctgcgccctctccgg
ggccgtgagccagagggggtctggaacctactcagcattgtacgagagatgttcaagcgg
cgggacagcaatgctgcccccttgctggaaatcctcactgatcagtgcctcacctacgaa
cagattacaggttggtggtacagtgtgcgcacctcagcctcacatagcagcgccagcggg
cacacaggccgtagcaatggtcagtcagaggtggcagcccacgcatgtgcaagcatgtgt
gacgagatggtcacactatggaggctggctgtgttagatcctgctctcagcccccagcgc
cggcgggaactgtgtgcacagctgcgtcagtggcagctaaaggtgattgaaaatgtaaag
cgaggacagcacaagaagaccctggagcggctctttcctggcttccggccagcagtggaa
gcctgttactttaactgggaagaggcctacccacttcctggtgtcacctacagtggcact
gaccggaagttagccctgtgttgggcccgggccctaccacctcggccaggagcctcccgt
tctggaggcctggaggaatcccgggaccggccccgacctcttcctactgacccagctgtg
cggcccaaagagcctggggccaaacgcaagggattgggtgagggggtctcctcgtcacag
cgggggccccgccgcctctctgctgaagggggagataaggctttgcacaaaatgggtcca
ggtgggggcaaaaccaaggtactgggtgggcctggcagtggaggcaagggctccgcgggc
aacgggagcaagagacggctgagcagtgaagacagctctctggagcccgatctggcagaa
atgagcctggatgacagcagcttggccctgggtgcagaggccagcacatttggtggattc
ccagaaagccctccaccttgtcctccccctggtggttcccgaggtccttctaccttcctc
cctgagcctccagatacttatgaagaagatgctggcgtgtacttctcagaagggcctgag
cctcccacagcctctgttgccccccctggcctcttgcctggtagagtctgtgctcgagat
gacctcccttccacggatgacagtggcagtggactccccaagaccaaggaggcatcccct
gcagttggagaagaggatgatgattaccaggcatattacctgaatgcgcaggacggggct
ggaggcgaggaggaaaaggctgagggcggggctggggaagaacatgacctgtttgctggg
ctgaagccactggaacaggagagccgcatggaggtgttatttgcttgtgctgaagccctg
catgcacacggctacagcagtgaggcttcccgcctcactgtggagcttgcccaggacctg
ctagccaacccacccgacctcaaggtagagccgccccctgccaagggcaagaagaacaag
gtgtccacaagccgtcagacctgggtagctaccaacaccctcaccaaggccgctttcctg
ctgacagtgctaagcgagcgccctgagcaccacaacctggccttccgagttggcatgttt
gccttggagctacagcgacccccagcttctaccaaggccttggaggtgaagctggcatac
caggagtctgaggtggctgccctcctcaagaaaatccctctgggtcccagtgagatgagt
accatgcggtgccgggcagaggagcttcgggaaggcacactctgtgactatcggcccgtg
ttgcccctcatgttggccagtttcatctttgatgttctctgtgctccagtggtttccccc
acgggttcccgtcccccaagtcgcaactggaacaatgagatgcctggagatgaagagctg
ggatttgaagcagcagttgctgccttgggcatgaagacaacagtgagcgaggcagaacat
cccctcctgtgtgaaggcacacgtcgggagaagggtgacctggcattagcgcttatgatc
acttacaaggatgaccaggctaagctcaagaagatcttagataaactcttggaccgagag
agccagacacacaagccacagacactgagttcattctactcatctagccgcccggccaca
gccaaccagaggtctccttccaagcacggggccccgtctgccccaggggccctacagcca
ttggcctcaggctctgcagggcctgctcagccagggaacatggcagggactgggccaggc
cccactgagggctacacagagaagaatgtgcctgaaagctctccacattctccctgtgat
ggtctcccacctgaggcagctttgaccccaaggccggaggggaaggttcccagtcgtctg
gcactcggcagtcgtggaggctataatggacggggctggggatctccagggaggcccaaa
aagaagcacacaggcatggccagcattgacagcagtgccccagagacaacatcggatagc
tcccccaccttaagccggagaccactgcgaggaggctgggcccccacttcttggggtcga
ggacaagacagtgacagcattagcagctcctcatcggactcactgggttcctcatcctcc
agtggaagtcgccgagccagtgccagtggaggggcccgagcaaagacagttgaagtgggc
aggtacaagggccggcgccccgagagtcatgccccgcacgtacccaatcagccctcagag
gcagctgcacacttctatttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccatttttacacatccatcttcctcagggggccaccagggtcctcatcgc
aacctgcacctttgcgccttcgaaattgggctttatgccctcggcctgcacaactttgtt
tctccaaactggctctcacgtacctattcctcccacgtttcctggattacagggcaggca
atggagattggcagtgcagccctgactatattggtagaatgctgggatgggcacctgaca
ccccctgaggtcgcatccctggctgatagagcatctcgggcacgagactccaatatggtg
agggccgcagcagagttggccctaagctgcctgcctcatgctcatgcgttgaaccccaat
gaaatccagcgggccttggtgcagtgcaaagagcaggacaacttgatgttggagaaggcc
tgcatggcagtggaagaggctgctaagggtgggggcgtgtaccctgaagtgttgtttgag
gttgctcaccagtggttctggctgtatgagcaaacagcaggtggctcatgcacagctcgt
gagggggctaccagctgtagtgtcagcgggatcagggcagctggggaggctggacgggga
ctgcctgagggaagggggggcccagggactgaggctgttacagtggcagcagcggcagca
gtgacggcagcagctacagtggttccagttatttcagtggggtccagtttatatccaggt
ccaggactggggcacggtcactcccctggcctgcacccctacactgctctacagccccac
ctgccctgcagcccccagtacctcactcatccagctcaccctgcccaccccatgcctcat
atgccccggcctgctgtcttcccggtgcctggctctgcatacccacagggtgtgcatcct
gcattcctgggggctcagtacccttactccgtgactcctccctccctcgctgccactgct
gtgtctttccctgtcccttccatggcacccatcacagtccatccctaccacacagagcca
gggctcccactgcccaccagtgtggcctgtgagttgtgggggcagggaacagtgagcagt
gtccacccagcatccacatttccagccatccagggggcatcactgcctgctctgactaca
cagcccagccctctagtgagcgggggcttcccaccacccgaggaggagacgcacagtcaa
cctgtcaatccacacagtctgcaccacctgcacgctgcctaccgagttggaatgctggca
ctggagatgctgggtcgccgggcacacaatgatcaccccaacaacttctcccgctccccc
ccctacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagatcgtcat
ggagacgctgcagcggctgaaccccgctcatgcccacaaccacctgcgtgcccccgcctt
ccaccaactggtgcagcgctgccaacaggcatacatgcagtacatccaccaccgcttaat
tcacctaacccccgccgactacgacgacttcgtgaatgccatccgcagtgctcgcagcgc
cttctgcctgacacccatgggcatgatgcagttcaacgacatcctgcagaacctcaagcg
cagcaaacagaccaaggagttgtggcagcgggtctctctcgagatgaccgccttttcccc
ctaagtctggcccccttagggttctgcatagggacacaggcctttggctctaggggtctc
ttaaacagagggagtgagatttggctggacggatcatcatgcctgctcagttccctggta
gcccaaacaggcagctgctcttggacgatagtttggggccaagatatctcagacccgaga
agccttgggctaggggagacagccctatctgggaaggggcgttgggtgacttctggtatt
tatttggcatttataaatatataa
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