Dipodomys ordii (Ord's kangaroo rat): 105992808
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Entry
105992808 CDS
T07834
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04151
PI3K-Akt signaling pathway
dord04510
Focal adhesion
dord04512
ECM-receptor interaction
dord04820
Cytoskeleton in muscle cells
dord04926
Relaxin signaling pathway
dord04933
AGE-RAGE signaling pathway in diabetic complications
dord04974
Protein digestion and absorption
dord05146
Amoebiasis
dord05165
Human papillomavirus infection
dord05200
Pathways in cancer
dord05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105992808 (Col4a5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105992808 (Col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105992808 (Col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105992808 (Col4a5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105992808 (Col4a5)
09154 Digestive system
04974 Protein digestion and absorption
105992808 (Col4a5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105992808 (Col4a5)
09162 Cancer: specific types
05222 Small cell lung cancer
105992808 (Col4a5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105992808 (Col4a5)
09174 Infectious disease: parasitic
05146 Amoebiasis
105992808 (Col4a5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105992808 (Col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dord04147
]
105992808 (Col4a5)
00536 Glycosaminoglycan binding proteins [BR:
dord00536
]
105992808 (Col4a5)
Exosome [BR:
dord04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105992808 (Col4a5)
Glycosaminoglycan binding proteins [BR:
dord00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105992808 (Col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105992808
NCBI-ProteinID:
XP_012881331
Ensembl:
ENSDORG00000012606
UniProt:
A0A1S3FXP4
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MKLRGVNLAAGLFLLALSLWGQPAEAAACYGCSPGSKCACSGVKGEKGEQGYPGVRGHPG
LPGFPGPEGPPGHQGQKGDDGIPGPPGPKGIRGSPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGSPGYPGRPG
IQGPAGPMGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGDPGDPGPPGPPGMCGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGQKGQKGDTGPPGPPGLVIPTPGTGVIVGEKGN
PGLPGLPGEKGERGFPGVQGPPGLPGPPGTAVTGPPGPPGFPGERGQKGDNGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPYIPIRDELCKAGPPGSPGTPGDKGFPGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGIPGQKGEKGHAGATGLKGLPGIPGAPGTPGF
PGSKGDPGDILTLPGMKGEKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNMGPMGPVGFGPPGPIGEKGVQGVPGNQGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGDPGLPGQPGFPGIPGSKGEPGSPGIGLPGPPGLKGFPGI
PGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFGLPGPPGPPGIPGFKGTLGPKGDRGFP
GPPGSPGRTGLDGLPGPKGDIGPNGQPGPVGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDIPGPPGDRGSPGLPGAPGPIGPPGSPGLPGKAGASGFPGIKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGEPGLPGPEGEKGGKGEPGLPGPPGPIDPSRL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLIGQPGLPGPPGPKGNPGLPGQPGLI
GPPGLKGNLGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGDKGDPGVSGIGLPGLPG
PKGEPGLPGYPGNPGTKGSVGDIGFPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIIGPPG
NPGLPGEPGPVGGGGHPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGSPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPTGFQGLPGPEGPRGLPGNGGIKGEKGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGIPGSAGLEGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGVPGPPGLKGPPGLPGPQGLPGATGPPGNPGRNGLPGFDGAGGRKGDPGVPGQPGS
RGLDGPPGPDGLQGPPGPPGSSSVAHGFLITRHSQTTDAPQCPHGTIQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPKPMPMNMEPLKG
QSIEPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWESLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcaacctggctgccggcttgttcttactggccctgagtctttgg
ggacagccggcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgcctgt
agtggtgttaaaggggaaaagggagaacaaggatatccaggtgtaagaggccatccaggt
ttacctggatttccaggtccagaagggcctcctggacatcagggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggatctcctggactacctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggagccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggcttacagggacctccaggacctcctggtatcccaggtatgaagggggaaccagggagt
atcatcatgtcatcactgccaggaccaaaggggagcccaggatatccaggtcgtcctggg
atacaaggcccagctggccccatgggcataccagggccaattggccccccaggaccacca
ggtttgatgggccctcctggcccaccaggactgccaggaccaaaggggaatatgggttta
aacttccagggacccaaaggtgaaaagggtgagcaaggtcttcaggggccacctgggcca
cctgggcagatcagtgagcagaaaagaccaattgatgtagagtttcaaaaaggagatcag
ggagatcctggtgacccaggaccacctggacctccggggatgtgtggccctcctggccct
cctggtggtgtgaaaggtgagaagggtgagcaaggagagccaggcaaacgaggtaaacca
ggcaaagatggagagaatggtcaaccaggaattccaggtttgcctggtgatcctggatac
cctggggaaccaggaagggatggtcaaaagggccaaaagggtgacactggtccacctggg
cctcctggactggtaattcctacacctggtactggtgtgattgtgggagaaaaaggaaat
cctgggttgcctggcttgcctggagaaaaaggagaaagaggatttcctggagtacagggt
ccacctggccttcctggacctccagggactgcagttacaggtcctcctggtccccctggt
tttcctggagaaagaggccagaaaggtgataatggtccacctggaatttcgattcctgga
tctcctggacttgatggacaacctggggctcctggccttccagggcctcctggccctcct
ggcccctatatcccaattcgtgatgagctatgtaaagcaggcccaccaggctccccagga
actccaggtgataaaggatttccaggagaacaaggagtaaaaggtgataaaggagacacc
tgcttcaactgtattggaactggtatatcgggacctccaggacaacctggtttgccaggt
ctcccaggtcctccaggatctcttggcattcctggacagaagggtgaaaagggacatgca
ggagcaactggtctgaaaggattgccaggcataccaggagcaccaggtactccaggcttt
cctggatctaaaggtgatcctggtgacatcctcactcttccgggaatgaagggtgaaaag
ggagagctgggatctcctggagctccagggcttccaggtttacctggcactccaggacag
gatggattgccagggcttcctgggcccaaaggagagcctggtggaattgcttttaagggt
gaaagaggtccccctggaaatccaggcttgccgggtctcccagggaatatgggccctatg
ggcccagttggttttggccctccaggcccaataggtgaaaaaggcgtgcaaggtgttcca
ggaaatcaaggccaaccaggaattccaggtcctaaaggtgatcccggtcagaccataacc
cagccaggaaagcctggcctgcctggtcatccaggtagagatggtgaagtaggtcttcca
ggcgaccctggacttccaggccaaccaggattcccaggaatacctggtagcaaaggagaa
ccaggtagccctggaattgggcttcctggaccacctggtctcaaaggttttccaggaatt
ccaggacctcccggagctcctgggacacctggaagaattggtttagaaggccctcctggg
ccaccaggctttccaggaccaaagggagagccaggatttgggctacctggaccacctggg
ccaccagggatcccaggtttcaaaggaacacttggtccaaaaggtgatcgtggttttcca
ggacctccaggttctcccggacgcactggcttggatggcctaccaggaccaaaaggtgat
attggaccaaatggacaacctgggccagtagggcctcctgggctgccaggaattggtgtt
cagggaccaccaggaccaccaggaattcctggaccaataggccagcctggcttacatgga
ctaccgggagagaagggagatccaggacctcctgggtttgatattccaggtcctcctggt
gatagaggcagtccagggctccctggagctcctggccctataggacctccaggatcacca
ggcctcccaggaaaagcaggtgcctctggatttccaggtattaaaggagaaatgggtatg
atggggcctccaggcccaccaggacctttgggaattcccggtaggagtggtgttcctggc
ctcaaaggtgatgatggcttgcagggtgagccaggacttcctggccctgaaggagaaaaa
ggtggaaaaggagagcctggccttccaggcccccctggaccaatagatccaagtcgcttg
ggctccaaaggagagaaaggggaacctggtttaccaggtattcctgggctttctggacca
aaaggctaccagggattacctggagacccagggcaaccaggactgattggacaacctgga
ttaccaggacctccaggtcccaagggtaaccctggtctccccggccagccaggacttata
ggacctcctggacttaaaggaaatcttggtgatatgggtttcccaggccctcagggtgtg
gatgggccccctgggcctcctggagttcctggacagcctggctctccaggattacctgga
cagaaaggagataaaggtgatcctggtgtttcaggaattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccagggaacccaggtactaaaggatctgtg
ggagatattggctttcctggattaccagggacacctggagctaaagggcagccaggattg
cctggattcccaggaaccccaggccctcctggaccaaagggtattattggtcctcctggg
aaccctggtcttcccggagaacctggtcctgtaggtgggggaggccaccctgggccacca
ggacctccaggtgaaaaaggcaaaccaggtcaagatgggattcctggaccagcaggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggaggatcacctggcattccaggaaatcctggccttccaggt
ccaaaaggtgaaccaggctttcagggttttcctggtgtgcagggtccccctggcccacct
ggttctcctggtccagctctggaaggtcctaaaggcaaccctgggccccaaggtcctcca
ggaagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccacggggtctc
cctggaaatggaggtattaaaggagagaagggaaacccaggcccacctgggcaacctggc
ttgcctggcttgaaaggagatcaaggaccaccaggactcccgggtaaccctggccgacca
ggtctcaatggaatgaaaggagatcctggactccctggtgttccaggattcccaggcatg
aaaggacctattggaatacctggttcagctggtcttgagggtgaaccaggacttactggc
ccaccaggtcctcctgggttacctggtccttcaggacagagtattataatcaaaggagat
gctggtcctccaggggttcctggtccacccgggttaaaaggtccaccaggattaccgggc
cctcaaggtttaccaggtgctactggcccaccaggaaatcctggacgtaatggactccct
ggttttgatggtgctggagggcgcaaaggagacccaggtgtgccaggacagcccggttcc
cggggtttggatggtcccccagggccagatggactgcaaggtcctccaggtccccctgga
agttcttctgttgcccatggattcctcatcacacgtcacagccagacaacagatgcacca
caatgcccacatggaacgatccagatctatgaaggcttttctctcttgtatgtgcaagga
aacaaaagagcccacggccaagatttgggaactgctggcagctgccttcgtcgattcagt
accatgcctttcatgttctgcaatatcaataatgtttgcaattttgcttcaagaaatgac
tactcttactggctctccaccccaaaacctatgccaatgaacatggaacctctgaaaggc
cagagtatcgagccatttattagtagatgtgcagtatgtgaagctccagctgtggtgatt
gcagttcacagtcagaccatccagattccccactgtcctcaaggatgggaatctctatgg
atcggttattcctttatgatgcatacaagtgcaggggcagagggctcaggacaagccttg
gcctctcctggttcctgtttggaagagttccgttctgctcctttcatcgaatgtcatggg
cgaggaacttgtaattactatgccaactcctatagcttttggctggcaactgtagatgtg
tcagatatgttcagtaaacctcagtcagaaacactgaaagcaggagacttgaggacacgt
attagccggtgtcaagtgtgcatgaagaggacatag
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integrated database retrieval system
