Dipodomys ordii (Ord's kangaroo rat): 105992854
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Entry
105992854 CDS
T07834
Symbol
Sox3
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dord03000
]
105992854 (Sox3)
Transcription factors [BR:
dord03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105992854 (Sox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105992854
NCBI-ProteinID:
XP_012881388
UniProt:
A0A1S3FXV6
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAREHRQKGAAKLGLGRRGAAAGASCPQVPAHSAPSASWASLPFPPHRLASRPPSAPPTE
CPGLFTVAAPPPGAPSPPATLAHLLPSPAMYSLLETELKNPVGPPTPAAGTGGAAVPGGA
GKSSANPGSGANASGGSSGAANGGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMH
NSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRNPVGVGQRLDTYT
HVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQMHRYDMAGLQYSPMMPPGAQSYMN
AAAAAAAASGYGGMAPSAAAAAAAAMSLGPMGSVVKSEPSSPPPAITSHSQRACLGDLRD
MISMYLPPGGDAADATSPLPGGRLHGVHQHYQGAGTAVNGTVPLTHI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagagcacagacaaaaaggggccgcgaagctggggctggggaggagaggggca
gcagcaggtgcgagttgcccgcaggttccagcccactcggcgccgagcgcttcttgggcg
agtctgcccttcccgccccatcgcctggcctcccggccccccagcgcccctccgacggag
tgtccgggccttttcaccgtggccgctccacccccgggagcgccttctcctcccgccacc
ctggcgcaccttcttccctccccggccatgtacagccttttggagactgagctcaagaac
cccgtggggccgcccaccccagccgcgggcacgggcggcgccgcagttcccggcggtgca
ggcaagagtagcgcgaatccaggcagcggtgcgaacgcaagcggtggcagcagcggtgct
gcgaacggcggcggcggcgggggcacggatcaggatcgcgtgaagcggcccatgaacgct
ttcatggtctggtcccgcgggcagcggcgcaagatggccctggagaaccccaagatgcac
aactcggagatcagcaagcgcttgggggccgattggaaactgctgaccgacgccgagaag
cgaccgttcatagacgaagccaagcggctgcgcgccgtgcacatgaaggagtacccggac
tacaagtaccggccgcgccgcaacccagtgggcgtgggccagcgcctggacacgtacacg
cacgtgaacggctgggccaacggcgcgtactcgctggtgcaggagcagctgggctacgcg
cagcccccgagcatgagcagcccgccgccgccgccggctctcccgcaaatgcaccgctac
gacatggccggcctgcagtacagccccatgatgccccccggcgcccagagctacatgaat
gccgcggccgccgccgccgccgcttcgggctacgggggcatggcgccctccgctgccgcc
gccgccgccgccgccatgagcctgggccccatgggctcggtggtgaagtccgaacccagc
tccccgcctcccgccatcacgtcgcactcgcagcgcgcgtgcctcggtgacctgcgcgac
atgatcagcatgtacctgccacccggcggggatgcggccgacgccacctcgccgctgccc
ggcggacgtctgcacggggtgcaccagcactaccagggagccgggactgccgtcaacggc
acggtgccgctgacccacatctga
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