Dipodomys ordii (Ord's kangaroo rat): 105992864
Help
Entry
105992864 CDS
T07834
Symbol
Wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dord03032
]
105992864 (Wrn)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105992864 (Wrn)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105992864 (Wrn)
DNA replication proteins [BR:
dord03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105992864 (Wrn)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105992864 (Wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
DUF2442
Motif
Other DBs
NCBI-GeneID:
105992864
NCBI-ProteinID:
XP_012881404
Ensembl:
ENSDORG00000002696
UniProt:
A0A1S3FZD6
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MNSKKLETPPPQRKFPEWMVSMQNKGCTEEERKAYIQKSVFEDDLPFLEFTGSIVYSYEA
SDCSFLSENISVNLSDGEVVGFDMEWPPINRKGKPSRVALIQLCVSENKCYLFHISSMSV
FPQGLKRLLENTAIKKVGVGIEGDQWKLLHDFDVKLTSFVELKDVANEKLKCSETWSLNG
LVKHLLYKQLLKDKAIRCSNWSNFPLSEDQKLYAATDAYAGLIIYKKLEILGGAMQTFAR
NKEEKILPLEMKKQLTSISEEVMDMANHFPDTCRKLENPERVSILLKNISESLFSLRKIL
FGPTKITTEVRPSNHFNVSLEDSTVGREQQKETTEKSLTEDKDETWDTSLDNLVKHGGHD
VLVKVKQEEGLEDEFENNKLKENMERTCQMSLDITEYELQILEQLNEKQTLSDFSHQCTE
HSSVNNNEHDSSYIIESDEDLEMEMLKSLEDLNSSPVESVHSQCLKMERNLSFPTEEDKN
KDEVEEGKEEEQEEEEVEEEAEEEDNEDHLLPEPSATQIICLKTYFGHCSFKPVQWKVIY
SVLEERRDNVVVMATGYGKSLCFQYPPVYVGKIGIVISPLISLMEDQVLQLQMSNISACF
LGSAQPKNVLEDIKLGKYQIVYITPEFCSGNLDLLRQLETKIGISLIAVDEAHCISEWGH
EFRSSFRSLGSLKAALPLVPVVALTATASSSIREDIVRCLNLKNPRITCTGFDRPNLYLE
VGRKTGNILQDLKPFLVKKTSSAWEFEGPTIIYCPSRKMTEQITVELRKLKLACGTYHAG
MDFKTRKDIHHKFMRDEIQCVIATIAFGLGINKADIRRVIHYGAPKEMESYYQEIGRAGR
DGLQSSCHLLWTPADFNITRHHLFEIRNEKFRLYKLKMMAKMEKYLHSSKCRRQIILSHF
EDKKLRKASLGIMGTEKCCDNCRSRLSHCYTVNDLDETSKDFGRQAFLLLSAVDILEEKF
GIGVPILFLRGSSSQRLADRYRSHKLFGTGKDETESWWKAFSRHLMTEGFLVEVPGSNKF
VKICILTKKGRNWLDKANKGSPQRLILEPNEELCPKKFLLPSWKALSSGTEQHSSNQIPV
ELTAEKKSNLEKMYSYKALEKIPSGSNISEKRIMIQSPGKCDHLAEPALSAQEQEAQTVL
YGKLVEARQKYANKMDVPPAILATNKILLDMAKLRPTTVEDVKQIDGVSEGKATMLAPLL
EVVKHFCHENSAKTDLFSSTKPQEEQEKSSLSQSAAVTYSLFQEKKMSLHSIAENRILPL
TAVGMHLAQAVKAGYPLDMERAGLTPEVQKIIADVIRNPPINSDMYNIKLIRMLVPENID
VYLIHMAIEILENDHDCRPSSSQSSWDSNRKRCFPNSEEPCSSSKRSKEVLTDTKVEETH
LDSISLEDKGHSNSIRLTSWTQPSSDPETEDSFSHSHSQTSSETSKRRLPDWFAKGNTTL
AVCNKKSTTKTKKKGLFS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaaaaattggaaacaccaccaccacagcgtaaatttcctgaatggatggtg
tctatgcagaataaaggatgtactgaagaggaaagaaaggcatatattcagaagagtgtt
tttgaagatgacctccccttcttagaattcactggatccattgtttatagttatgaagct
agtgattgctcttttctatcagaaaatattagcgtaaatctgtctgatggggaagtggta
ggatttgacatggaatggccacccattaatagaaaagggaaaccaagcagagttgcacta
attcagttatgtgtgtctgagaacaaatgttatttgtttcacatttcttctatgtcagtt
tttccccagggattaaaacgattacttgaaaatacagcaattaaaaaggtgggggtagga
attgaaggagatcaatggaaacttctgcatgactttgatgtcaagttgacaagtttcgtg
gagttgaaagatgttgccaatgaaaagctgaaatgttcagagacctggagccttaatggc
ctggttaaacacctcttatataaacagcttctgaaagacaaagctattcgctgtagcaac
tggagtaactttcccctctctgaagaccagaagctgtatgcagctactgatgcttatgct
ggactcatcatttataaaaaattagaaatcctgggtggtgccatgcaaacatttgctaga
aataaagaggagaaaattctacctcttgaaatgaagaaacagttgacttcaatctctgaa
gaagtgatggatatggctaatcattttcctgacacttgcagaaaattagaaaatccagag
agggtttctattttattgaagaatatttcagaaagtctgttttcactgaggaagattctg
tttggtcctacaaaaatcaccaccgaagtgaggcccagtaatcattttaatgtatcgttg
gaggattcaactgttggtagagaacagcagaaagaaactacagaaaaaagtcttactgaa
gataaggatgagacatgggatacatcactggataatctagttaaacatggtggacatgat
gtacttgtaaaagtgaaacaagaagaagggttggaagatgaatttgaaaataataagttg
aaagaaaacatggaaagaacatgccaaatgtcattagatattacagagtatgaacttcaa
atattggaacagctgaatgagaaacaaaccctcagtgatttttcccaccagtgcactgag
cattcttcagtcaacaataatgaacatgattcatcttacataattgaaagtgatgaagat
ttagaaatggagatgctgaagtctttagaagatttaaatagtagccctgtagagtcagtt
cattctcagtgcttaaaaatggaaagaaacttgagttttcctactgaagaagataaaaat
aaagatgaagttgaagaaggaaaagaagaagaacaagaagaagaagaagttgaagaagaa
gcagaagaagaagataatgaagatcatttgttgccagaacccagtgcaacgcaaattatt
tgcctcaagacctattttggccattgcagttttaaaccggtccagtggaaagttatttat
tctgtattggaagaaagaagagataatgttgttgtcatggcaactgggtatggaaagagt
ttgtgcttccagtatcctcctgtatatgtaggcaagattggcattgtcatctcacctctt
atttctctgatggaagaccaagtgctccagcttcaaatgtccaacatttcggcctgtttc
cttggatctgcacaaccaaaaaatgttttggaagatatcaaattaggcaagtaccagatt
gtatatataactccagaattctgctcaggtaatttggacctgcttcggcagcttgagact
aagattggtatctcgcttattgctgtggatgaggctcactgtatttctgagtgggggcat
gaatttagaagttctttcaggtcattgggctccctgaaggcagcactcccattggttcca
gtagttgcactcacagctactgccagttcttcaattcgagaagacatagtacgttgttta
aacctgaaaaacccacggattacttgtactggttttgatcgaccaaatctgtatttagaa
gtgggacgaaaaacagggaatatccttcaggatttgaagccatttcttgtaaaaaagaca
agttctgcctgggaatttgaaggtccaactatcatctattgtccttccagaaaaatgaca
gaacaaattaccgttgaacttagaaaactgaagttagcctgtggaacataccatgcaggc
atggatttcaaaacaaggaaggatattcatcataagttcatgagagatgaaattcagtgt
gttatagctactatagcttttggactgggcattaataaggctgacattcgcagagtcatt
cattatggtgctcctaaggaaatggaatcctattatcaggaaattggtagagcaggccgc
gatggacttcaaagttcttgtcacttactctggactccagcagactttaacataactagg
caccacttgtttgagatacgtaatgaaaagttccgactgtataaattaaagatgatggcc
aagatggaaaagtatcttcattccagcaaatgtagacgacaaatcatcttgtctcatttt
gaggacaaaaaactaagaaaggcttccttgggcatcatgggaactgaaaaatgctgtgat
aattgcaggtccaggttaagtcattgctacactgttaatgacttggatgagacatcaaag
gactttggtcgacaggcattcctgctactatctgctgtagacatcttagaggaaaaattt
ggcattggggttccaattttatttctccgaggatctagttctcagcgtcttgcagataga
taccgctctcacaagctttttggcactggcaaggatgaaacagagagttggtggaaagcc
ttttcccgtcaccttatgacagaaggattcttggtagaagttcctgggagtaataaattt
gtaaagatttgcatccttacaaaaaagggtagaaattggcttgataaagccaataaagga
tctcctcagagacttattcttgaacctaatgaagaactgtgtccaaagaagtttcttctg
ccaagttggaaagctttgtcttcaggcactgaacagcattcctctaatcaaataccagtt
gaattaactgcagagaagaagtctaacttggagaagatgtattcttacaaagcacttgag
aaaattccttctgggagtaacatttctgaaaaaagaatcatgattcagtcaccgggaaaa
tgtgaccatcttgcagaaccagctctttcagctcaagaacaagaggctcagactgtgtta
tacggcaaattggtagaagctagacagaaatatgcaaataaaatggatgttcctccagct
attctggcaacaaataagatactgttggatatggccaaattgagaccaactactgttgaa
gatgtaaaacagatcgatggtgtttctgaaggaaaagctactatgctggctccactgttg
gaagttgtcaagcatttctgccatgaaaatagtgctaagacagacctcttttcaagtaca
aagcctcaagaagaacaggaaaaaagttcactctcacagtctgcagctgtcacatattct
ttattccaagaaaagaagatgtctttacacagcatagctgagaacaggattctgcctctc
acagcagttggtatgcacttagcccaggcagtgaaagctggttaccccctggatatggag
cgagcaggcctgactccagaggttcagaagattattgctgatgttatccgaaaccctccc
atcaactcagatatgtacaatataaaactaattagaatgttggttcctgaaaacattgat
gtgtaccttatccacatggcaattgagatccttgagaatgaccatgactgcagaccatct
tcaagccagtcttcctgggattccaacagaaagcgatgtttccccaactctgaagaacct
tgttcaagttctaaaaggagcaaggaagtactcacggatacgaaggttgaagaaacacat
cttgatagcatttcactggaagacaaaggccacagtaattcaataagactaacttcttgg
actcagccatccagtgatccagaaacagaagattcattttcacattctcattcacagact
tcatctgagacctcaaagagaagattgcctgactggtttgccaaaggaaatacgacttta
gctgtatgcaacaagaaatcaacaacaaaaacaaaaaagaaaggtctttttagttaa
DBGET
integrated database retrieval system
