KEGG   Dipodomys ordii (Ord's kangaroo rat): 105993328
Entry
105993328         CDS       T07834                                 
Symbol
Smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dord00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dord03041]
    105993328 (Smu1)
Spliceosome [BR:dord03041]
 Complex B
  Other components
   Complex B specific factors
    105993328 (Smu1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 DUF7165 Beta-prop_IP5PC_F VPS8_N PROPPIN TFIIIC_delta Beta-prop_BBS7 LisH zf_topless
Other DBs
NCBI-GeneID: 105993328
NCBI-ProteinID: XP_012882018
Ensembl: ENSDORG00000006011
UniProt: A0A1S3FZP0
LinkDB
Position
Unknown
AA seq 490 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKVKYLKLVPFGMSALLLFFEKVAVMIMVMNVLEKIVRSFSSGKREGG
DFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYS
EDGLLKLWKP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcttccgatgtgatccgtcttatcatgcagtacttgaaggag
aacagtttacatcgggccttggctaccttacaagaggagactaccgtctctctgaataca
gtggacagcattgagagttttgtggctgacattaatagtggccattgggatactgtttta
caagctatacagtctctaaaattgccagacaaaacccttattgacctctatgaacaggtt
gttctggaattgatagaactccgagaattgggtgctgccagatcacttttgagacagact
gaccccatgattatgttaaagcaaacacagccagagcggtatattcatctggagaacctc
ttggccaggtcttattttgatcctcgtgaggcatacccagatggaagtagcaaagagaaa
agaagagcagccattgcccaagccttagctggggaagtcagtgtggtacctccatctcgt
ctcatggcattgctcggacaggcgctgaagtggcaacagcaccaagggttgcttcctcct
ggtatgaccatagatttgtttcgaggtaaagcagctgtaaaagatgtggaagaagaaaag
tttcctacacagctgagcaggcatattaagtttggtcagaaatcacatgtggaatgtgct
agattttctccagatggtcaatatctggtcactgggtctgttgatggatttattgaagta
tggaactttactactggaaaaatcaggaaggatcttaaataccaggcacaggataacttc
atgatgatggacgatgctgtcctctgcatgtgttttagcagagatacagaaatgttagca
actggggcccaagatggaaaaatcaaggtgtggaagattcagagtggacagtgtttaagg
aggtttgaaagggcacacagtaaaggtgtcacctgtctaagcttttccaaagatagcagt
cagatccttagtgcctcttttgaccagacaatcagaattcatggtttaaaatccgggaaa
accctgaaggaatttcgtggtcattcctcttttgttaatgaagcaacatttacacaagat
ggacattatattatcagtgcttcctctgatggcactgtaaaggttaagtatttgaaactg
gttccttttgggatgtctgctttacttttgttctttgagaaggttgcagtcatgataatg
gtaatgaatgtgttggagaagattgtcagaagcttcagctctggtaaaagagaaggtggt
gactttgtttgctgtgctctctctcctcgtggtgaatggatttactgtgtgggggaagac
tttgtgctctactgctttagcacagtcactggcaagctggagagaactttgacagttcac
gagaaggatgtgattggtattgcacatcatcctcatcagaatttgattgctacctacagt
gaagatggactcttaaagctctggaaaccctaa

DBGET integrated database retrieval system