Dipodomys ordii (Ord's kangaroo rat): 105993334
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Entry
105993334 CDS
T07834
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dord01009
]
105993334 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dord04121
]
105993334 (Sh3rf1)
Enzymes [BR:
dord01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105993334 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
dord01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105993334 (Sh3rf1)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105993334 (Sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
105993334
NCBI-ProteinID:
XP_012882025
Ensembl:
ENSDORG00000004433
UniProt:
A0A1S3G055
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGILGSRNELRCPECRTLVGSGV
EELPSNILLVRLLDGIKQRPWKPGPGGGSGTNCTNALRAQGSTANCNAKDLQSSQGGQQP
RVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHG
FFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGM
LADKIGIFPISYVEFNSAAKQLIEWDKPPTAGGDAGECTSAAVQGSAAPKHSDTKKNTKK
RHSFTSLTMASKSSQASQHRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIST
TGLIVTPPPSSPVTTGSAFTFPSDVSYQAALGTMNPPLPPPPLLAATVLASTPPGSAAAA
AAATGVGPRPGTGPTDQIAHLRPQSRPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQD
GWFKGTSMHTSKIGVFPGNYVAPVTSRTVTNASQAKVPVSTAGQTSRVVTMVSPSSAGAP
APKLQGNGVAGSPSVVPTAVVSAAHIQTSPQAKVLLQMTGQMTVNQARNAVRTVAAHNQE
RPTAAVTPIQVQNTTCLGLAPVGLPHHSLASPQPLPAMAGAAAAAAAAAGGISRASAPLA
SSSITAACLETEPSGRTVTILPGLPTSPDNVSSACGNSSTSKPDKDSKKEKKGLLKLLSG
ASTKRKPRVSPPASPTLDMDLGGGELFLQGAVGPELPLGGSHGRTNSCSMDGEGTATGAA
GAASVQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVLNESRPVVCERHRVVVSYPPQSEA
ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgccttgctggatcttctggagtgtcctgtgtgtctagaacgcttggat
gcatcggccaaggtcctgccttgccagcacacgttttgcaaacgatgtttgctggggatc
ctaggttcccggaatgaacttagatgtcctgagtgcaggacgctggttggctctggggtg
gaggagcttcccagtaatatcctgctggtcagacttctggatggcatcaagcagaggcct
tggaaacctggcccgggtgggggcagtgggaccaactgcacaaatgcattaagggctcag
ggcagcacggctaactgtaatgccaaggacctgcagagctcccaaggtggacagcaacct
cgcgtgcaagcctggagccccccggtgaggggtatacctcagttaccatgtgccaaagca
ttatataactacgaaggaaaggagcctggagaccttaaattcagcaaaggagacatcatc
attttgcgacgacaagtagatgaaaattggtatcatggagaggtgaatggagtccatggc
tttttccccaccaactttgtgcagattatcaagccgttacctcagcccccaccacagtgc
aaagcactttacgactttgaagtgaaagacaaggaagcagataaagattgcctgccattt
gccaaggatgatgttctgactgtgatccgcagagtagacgaaaactgggctgagggaatg
ctggcagacaaaattggaatctttcccatttcatatgtggagtttaactcggctgccaag
cagctgatagaatgggataagccccccactgcaggaggggacgcaggagaatgtacctcg
gcagcggtccagggcagcgcggcccccaagcactccgacaccaagaagaacaccaaaaag
cgccactccttcacctccctcaccatggcaagcaagtcctcccaggcctcccagcaccgc
cactccatggaaatcagcccccccgtcctcatcagctccagcaaccccaccgctgccgcc
cgcatcagtgagctgtctggcctatcctgtagtgcaccttctcaggttcatataagtacc
actgggttaattgtgaccccacccccaagcagcccagtgaccaccggctcggcgttcact
ttcccatcagatgtttcctaccaggctgcccttggaactatgaatccgcctcttcctcca
ccccctctcctggctgccactgtcctggcctctacaccaccgggctctgctgctgccgcc
gccgctgctactggagtgggaccaaggcctgggacgggacccactgaccagattgcacat
ttacggcctcagagccgccccagcgtgtatgttgctatatatccatacactcctcggaag
gaggatgaactagagctgagaaaaggggagatgtttttggtgtttgaacgttgccaggat
ggttggttcaaagggacatcgatgcataccagcaagattggagttttccctggcaattat
gtggcaccagtcacaagcaggacggtaacaaatgcttctcaagctaaagtccctgtgtct
actgcgggacagacgagtcgagtggtgaccatggtcagcccttctagtgcaggagcgcct
gccccgaagctccagggaaatggtgtggctggcagtcccagtgtggttcccacggccgtg
gtatcagcagctcacatccagacaagtcctcaagctaaagtcctgttgcagatgactggg
cagatgaccgtcaaccaagcccgcaatgctgtgaggacagtggcagcacataaccaagag
cggcccacggcagcggtgacacccatccaggttcagaacaccacctgcctgggccttgca
cctgtgggcctgcctcatcactcgctagcctccccacagcctctgcctgctatggcaggt
gctgctgctgctgctgctgctgctgcgggcggtatcagtagggccagcgcccctctggcc
tcctcgagcatcaccgctgcctgcctggaaacggaacccagtggccggacggtgaccatt
ctccctggattgcccacatctcccgacaacgtttcctcggcttgtgggaacagttccaca
agcaagccagacaaggacagtaaaaaagaaaaaaaggggttgctgaagttgctttctgga
gcctctaccaaacggaagccccgagtgtcccctccagcgtcacccaccctggacatggac
ctggggggtggcgagttgttcttgcagggagcggtgggtcctgagctacccttaggcggc
agccatggtaggaccaactcctgctccatggatggggaaggaaccgccactggagccgca
ggagcagcctccgtccaggatgccttccaccggaagaccagttccctggactccgcagtg
cccatcgctccacctccccggcaggcctgctcctccctgggtcctgtcctgaatgagtcc
cggcctgtcgtttgtgaaaggcacagggtagtggtttcctaccctcctcagagtgaagca
gaacttgaactgaaagaaggagacattgtgtttgttcataaaaaacgagaagatggctgg
ttcaaaggcacattgcaacgtaatgggaaaactggcctgttcccaggaagcttcgtggaa
aacatctga
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integrated database retrieval system
