Dipodomys ordii (Ord's kangaroo rat): 105993443
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Entry
105993443 CDS
T07834
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105993443 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dord04121
]
105993443 (Trip12)
Enzymes [BR:
dord01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105993443 (Trip12)
Ubiquitin system [BR:
dord04121
]
Ubiquitin ligases (E3)
HECT type E3
105993443 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Motif
Other DBs
NCBI-GeneID:
105993443
NCBI-ProteinID:
XP_012882200
Ensembl:
ENSDORG00000012152
UniProt:
A0A1S3G0M8
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSGRQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHIESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GAAGSSRSQKRKRTESSCLKSGSGFESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTIPPGARVKQGKDQSKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGAMLGIESRVSHMLGSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKS
VVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAE
QALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFV
ADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTP
PILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRS
PQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDS
RIIEVAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYS
ELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAE
LLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKH
LAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATNAAADLGSPSLQHSRDDSLDLSP
QGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGR
LSAQSNSNNIEPARTAGVSGLARAASKDTLSNNREKIKGWIKEQAHKFVERYFSSENMDG
SNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLT
SKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPMGNAPLLALVHKMNNCLSQMEQF
PVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPL
ALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHL
LPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCV
GGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVI
LLLRVLHAVSRYWYYLYDNAMCKEIIPTSEFNNSKLTAKANRQLQDPLVIMTGNIPTWLT
ELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRT
VNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRG
EEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFR
LVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKES
LQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNE
GVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHD
SRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDF
LPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcaggaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaaacccaaagcacttcagcatatt
gagtctccctcagaaacaaataagccacatagtaagtcaaagaagagacatttagaccag
gaacaacaactgaaatctgcacaatcaccatcaacaagcaaggctcacaccagaaagagt
ggggccgctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtctaaag
agtggctctgggttcgaatcaactggtgccgaagagagatctgcaaaacctaccaagctg
gcttcaaaatctgccacctcagccaaagctgggtgtagcaccatcactgattcttcctct
gctgcctcaacttcctcatcatcttctgctgtagcctcagcctcttccaccatacctcca
ggtgccagggtgaagcaaggaaaagaccagagcaaggccagacgttcccgttcagcatcc
agtcctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaag
ttagcaagtttaagaaaatctaccaagaagcgcagtgagtcaccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggctcgtcggcaggagaaaatggcagac
cctgaaagcaatcaggagacagtgaattcttcagctgccagaacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgactacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctatgctggggattgaatccagggtctcgcacatgctaggttcaaaggcccag
cagcttctgcaaggactacaagccagtgatgaaagtcagcagcttcaagcagtcattgaa
atgtgtcagctattagtcatgggaaatgaggagacgctaggaggttttccggtcaagagt
gttgttccagctttgataacattactgcaaatggagcataattttgatattatgaaccat
gcctgccgagctttaacatacatgatggaagcacttcctcgatcatctgctgttgtagta
gatgctattccagtctttttagaaaagctgcaagttattcagtgcattgatgtggcagag
caggccttgactgccttggagatgttgtcacggagacacagtaaagctattctacaggca
ggtggtttggcagactgtttgctgtatcttgaattcttcagcataaatgcccaaagaaat
gcattagcaattgcagccaattgttgccagagtatcacaccagatgaatttcattttgtg
gcagattcccttccattgcttactcaaaggctgacacaccaggacaaaaagtcagttgaa
agcacttgcctttgttttgcacgtctagtagacaactttcaacatgaggaaaacttgcta
cagcaggttgcctccaaagatctgcttacaaatgttcaacaactgttagtagtgactcca
ccgatcttaagttctgggatgtttataatggttgttcggatgttttctctgatgtgttcc
aactgtccaacactagctgttcaactaatgaagcaaaacattgcagaaacacttcacttc
ctcctctgtggtgcctccaatggaagttgtcaggagcagattgatcttgttccacgaagt
cctcaagagctatatgaactgacatctttgatttgtgaacttatgccatgtttaccaaaa
gaaggcatttttgcggttgataccatgttgaagaaaggaaatgcacaaaacacagatggt
gcaatatggcagtggcgtgatgatcggggcctctggcatccttacaataggattgacagc
cggatcattgaggtagcagcccatcaggtcggtgaggatgagataagcttgtccactctg
ggacgagtttatactattgattttaattctatgcagcaaatcaatgaggacacggggaca
gcacgtgccattcagagaaaacctaaccccttagccaatactaacactagtggatattca
gagttaaagaaggatgatgctcgagcacagcttatgaaagaggatccggaactggctaag
tcttttatcaagacattgtttggtgttctttatgaagtatatagttcctcagcaggacct
gcagtcagacataagtgccttagagcaattcttaggataatttattttgcggatgccgag
cttctgaaggatgttctaaaaaatcatgctgtttcaagtcacattgcatccatgctatca
agtcaagacctgaagatagtagttggagcacttcagatggcagaaatcttaatgcagaag
ttacctgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagtaaaacat
ttagcagagtcagagtctttgttgacaagtccaccaaaggcatgtacgaatgggtcagga
tccttggggtctactacgtccgtgagcagtgggacagccacagccgccaccaatgctgca
gctgatctgggctcacctagcttgcagcacagcagagatgattctttggacctgagtcct
caaggtcgattaagtgatgttctaaagagaaaacgactgccaaaacgagggccacgaagg
ccaaagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagccccact
accactcagtcacctaaatcttccttcctggccagcttgaatccaaaaacatggggaagg
ttaagcgcacagtccaatagcaacaacattgagccagcacgaactgcaggagttagtggt
cttgccagggctgcctcaaaggacactctatccaataacagagaaaaaattaaaggttgg
attaaggagcaggcacataaatttgtagagcgctattttagttctgagaatatggatgga
agcaatcctgcactgaatgtccttcagagactttgtgctgcaactgaacaactcaacctc
caggtggatggtggagctgagtgccttgtagaaatccgtagcatagtctcagaatcagat
gtttcatcatttgaaatccagcatagtggatttgtgaagcagctgttgctttatttgaca
tctaaaagtgaaaaggatgccgtaagcagagagatcagattaaagcgatttcttcatgta
tttttttcttctcctcttccaggagaagagcctattggacgagtagaaccaatgggtaat
gcacctttattggcattagttcacaagatgaacaactgcctgagccaaatggaacagttt
ccagtcaaagtgcatgatttccccagtggaaatgggacaggaggaagcttttctctcaac
agaggatcacaggctttaaaatttttcaacacacatcagttaaaatgccaattacaaaga
catcctgattgtgcaaatgtgaaacagtggaagggtggacctgtcaagatcgacccattg
gcgttggtacaagctattgagagataccttgtagttagagggtatggaagagtaagagaa
gatgatgaagacagtgatgatgatggatcagatgaggaaatagacgaatctctggctgct
cagtttttaaattcaggaaatgtgagacacagactacagttttatattggagaacatttg
ctaccatacaatatgactgtgtatcaggcagtacgacagttcagtgtacaggctgaagat
gaaagagaatccacagatgatgaaagcaatcctctagggagagctgggatttggacaaag
actcataccatatggtacaaacctgtaagagaggatgaagaaagtaataaagactgtgtt
ggtggtaaaagaggaagagcccaaacagcgccaacaaaaacgtcccccagaaatgcaaaa
aagcatgatgagttatggcatgatggagtgtgcccatcagtatcaaatcctttagaagtt
taccttattcccacgccacctgaaaatatcacctttgaagacccatcattagatgtgatc
ctccttttaagagttttacatgctgtcagtcgatactggtattacttgtatgataatgca
atgtgcaaggagattattccaactagtgaatttaataacagtaaattgacagcaaaagca
aacaggcagcttcaagatcctttagtaatcatgacaggaaacatcccaacatggctaact
gagctaggaaaaacctgcccatttttctttccttttgatacccggcaaatgcttttttat
gtaactgcatttgatcgagaccgggcaatgcaaagattacttgataccaacccagaaatc
aaccagtctgattctcaagatagcagagttgcacctcgattggatagaaaaaaacgtact
gtgaacagagaggagttgttgaagcaagccgaatctgtaatgcaggaccttggcagttca
cgggccatgttagaaatccagtatgaaaatgaggttggtacaggtcttgggcctacactg
gagttttatgcacttgtatctcaggaactacagagagctgacttgggtctctggagaggt
gaagaagtaactcttagcaatccaaaaggaagccaagaagggaccaagtatattcaaaac
ctccagggcctgtttgcgcttccttttggtaggacagctaagccagctcatatcgcaaag
gttaagatgaagtttcgcttcttaggaaaattaatggctaaggctatcatggatttcaga
ttggtggaccttccccttggcttacccttttataagtggatgctacggcaagaaacttca
ctgacatcacatgatttatttgacatcgaccctgttgtagccagatcagtatatcacctg
gaagacattgtcagacagaagaaaagattggaacaagataaatctcagaccaaagagagt
ctacagtatgcattggaaacacttactatgaatggctgctcagttgaagatctaggattg
gatttcacgctgccagggtttcccaacattgaactaaagaaaggagggaaagatatacca
gtcactatccataatttagaagagtacctaagactggttatattctgggcactcaatgaa
ggtgtttctaggcaatttgattcatttcgagatggatttgaatccgttttcccactcagt
catcttcagtacttctatccagaggagctggatcagctcctctgtggcagtaaagcagac
acttgggatgcgaagacattgatggagtgctgcaggcctgatcatggctacactcatgac
agtcgggcggtgaagttcttgtttgagattctcagtagttttgataatgagcagcagagg
ttatttctccagtttgtgactggtagcccacgattgcctgttggaggatttcggagtctg
aatccacctttgactattgtccggaagacatttgaatcaacagaaaacccagatgatttc
ttaccttctgtaatgacttgtgtgaactatcttaagttgccggactactcaagcattgaa
ataatgcgtgacaaactgttgatagcagcgagagaagggcagcagtcattccatctttcc
tga
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integrated database retrieval system
