Dipodomys ordii (Ord's kangaroo rat): 105993572
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Entry
105993572 CDS
T07834
Symbol
Hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
dord05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105993572 (Hbs1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
105993572 (Hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105993572 (Hbs1l)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105993572 (Hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GIP1_N
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
105993572
NCBI-ProteinID:
XP_012882308
Ensembl:
ENSDORG00000005958
UniProt:
A0A1S3G0H7
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPVDYDYEELKDSP
NSHLNHQLSEIDQARLYSCLDHMREVLGDAVSDEILIEAILKNKFDVQKALSMVLEQDNV
QKLKDKSEKAVATGKIAKGKSVGSQSSRSESEIVPKVAKMTVSGKKQTMGFEVPGENGHG
LYTPQKGPPGEDNSIISSDSLDTVSKSALPPHSIQVSEEQSATPMSVKKSGKLKQQIDVK
VELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFA
YAWVLDETGEERERGVTMDVGMTKFETATKVITLMDAPGHKDFIPNMITGAAQADVAVLV
VDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGQF
LKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPF
RLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGD
HVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEVPITKGFPVLLHYQTVS
EPAVIKRLISVLSKSTGEVMKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLR
YSGSTIAAGVVTEIKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacatcgcaatgtccggggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttctccatcaacagctgctcagttt
atttactcacgacgtgacaaacctgtagactatgattatgaagaactgaaagactctccc
aattctcatttgaaccaccagctaagtgaaattgaccaagctcgtctttattcatgcctt
gatcacatgagagaggtattgggagatgctgtgtcagatgaaatactgattgaagcaatt
ttgaagaacaagtttgatgtgcagaaagccttgtccatggttctggaacaagataatgta
cagaagttgaaggacaagagtgaaaaagcagtagccacagggaagatagcaaaaggaaaa
tcagtaggatctcagtcatctcgaagtgaatctgaaattgtgccaaaagttgctaaaatg
actgtttctggaaagaagcaaactatgggatttgaagtgcctggagaaaatggtcatggt
ctctacacacctcagaaaggacctcctggtgaagataacagcatcatttcttctgacagt
cttgacaccgtctctaagtcagctcttccaccccactccattcaagtgtctgaagagcag
agcgcaacgccgatgtcagtgaaaaagtctggcaagctgaagcagcagattgatgtgaaa
gtggaactggagaagcggcaaggcgggaagcagctcctcaacctagtggtcattggtcac
gttgatgcggggaaaagcactctgatgggccatttgctttatcttctgggtaatgtgaac
aaaagaactatgcataaatatgaacaggagtctaaaaaggctggcaaagcttcgtttgca
tatgcatgggtcttggacgaaacgggtgaagaaagggaaaggggagtgacaatggatgtt
ggcatgacaaagtttgaaaccgcaaccaaagttattacattaatggatgctccaggccat
aaagattttattccaaatatgattacgggagcggcccaggcagatgtagctgtcttagtt
gttgatgccagcaggggagaatttgaagctggatttgagactggaggacaaactcgagag
catggcctcttggtccgatctcttggagtgacacaacttgcagttgcagtcaataaaatg
gatcaggttaattggcaacaagaaagatttcaagagattactggaaaacttggacaattt
cttaagcaagcaggttttaaggaaagtgatgtggcttttattcctacaagtggtctcagt
ggtgaaaatctaatcacaagatctcaatctagtgagctcacgaaatggtataaaggacta
tgtttattagaacaaattgattccttcaagcctcctcagagatctattgacaagcctttt
agattatgtgtgtcagatgtcttcaaagatcagggatctggattttgtgtgactggtaaa
attgaagctggctatattcagactggtgaccgactgttggcaatgcctcctaatgaaact
tgtactgcaaaaggaatcactcttcatgatgaacccgtcgattgggcagcagcaggcgat
catgttagtcttactttggttgggatggatatcatcaaaatcaatgttggctgcatattt
tgtggccccaaagaacccattaaagcttgtactcgttttagagcccgaatcctcatcttt
aatattgaagttccgatcactaaaggatttcctgtgctgttacactaccagactgtcagt
gaacctgctgttattaaacgactgattagtgtcttaagcaaaagcacgggtgaagtcatg
aagaaaaagcctaagttattgactaaaggccagaatgcattggtggaactacaaacacaa
agaccagtagcccttgagctttacaaagacttcaaggagctggggaggttcatgctgcgt
tacagcggttctacaattgctgctggtgtcgtcactgagataaaagaatga
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