Dipodomys ordii (Ord's kangaroo rat): 105993902
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Entry
105993902 CDS
T07834
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
105993902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dord04040
]
105993902
Ion channels [BR:
dord04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105993902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
ATP-synt_B
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
105993902
NCBI-ProteinID:
XP_012882737
UniProt:
A0A1S3G3W5
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDVPPEMVSEPLEDLDPFYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEEVVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRTKDIGSENDFADDEHST
FEDNDSRRDSLFVPHKHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETELRKRRSSSYHVSMDLLEDPTSRQRAMSIASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEHFSNVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKIANDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEISKDLNCLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIMGNVLLTLIAEWF
FQMLRTSMGGKEGRACDDDVFVSTGLPQEVYAKLTVFTNVYLRSVPITRQGPLVRNWNSR
NQRSSTSRRFLFAEPAEAAGEQRGVATQNTGASGKAGEGS
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tctcttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaagcaggaa
cgtaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagatgttcctccagagatggtgtcagagcccctggaggac
ctggacccattctatatcaataagaaaacatttatagtattgaataaaggaaaagcaatc
tcgcgattcagtgccacttctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgcttattatgtgcacaattctt
accaactgtgtatttatgacaatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacatttgaatcacttattaaaatacttgcaagaggtttttgt
ttagaagatttcacatttttacgggatccatggaattggttggatttcacagtcatcacg
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcaga
gttctccgggcattgaaaacaatttcagtcattccaggcctgaagaccattgtgggcgcc
ctcatccagtcggtgaagaagctctccgacgtcatgatcctcactgtgttctgtctgagt
gtgtttgctctcattgggctgcagctgttcatgggcaacctgaggaataaatgtttgcaa
tggcccccagacaattcttcctttgaactaaacatcacttccttctttaataactcattg
gatggaaatggtactacattcaataggactgtgagcatgtttaactgggatgaatacata
gaggataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggtaac
agctcagatgcaggccagtgtccagaagggtacatctgtgtcaaggccggtcgaaatccc
aactatggctacacaagctttgacacatttagctgggccttcttgtccttgtttcgtctc
atgactcaagacttctgggaaaacctctatcaactgacactgcgcgctgctgggaaaaca
tacatgatattttttgtgctagtcattttcttgggctcattctaccttataaatttgatt
ctggctgtggtagctatggcttatgaagagcagaatcaagctacactggaagaggcagaa
cagaaagaggcagaatttcagcagatgcttgaacagcttaaaaagcagcaggaagaagct
caggcagcagcagctgcagcatctgctgaatctagagatttcagcggagctggtggaata
ggagttttctccgagagctcctccgtagcatccaagttgagctccaagagtgaaaaagag
ctgaaaaacagaagaaagaagaagaagcaaaaagaacagtctggagaagaagagaaggaa
gaggtagtccgaaaatcagaatctgaagacagcataagaagaaaaggattccggttttcc
ttagaaggaagcagattgacctatgagaagagattttcttctccacaccagtctttattg
agcattcgaggctcccttttctctccaagacgcaacagtagagcgagccttttcagcttc
agaggtcgaaccaaggacattggttctgagaacgactttgccgatgatgagcacagcacc
tttgaggacaatgacagtcgaagagactcgctatttgtgccgcacaaacatggcgaacgg
cggcacagcaacgtgagccaggccagccgagcttccagggtccttcccattctgcccatg
aacgggaagatgcacagcgccgtggactgcaatggagtggtctcccttgtcgggggtccc
tctgcactcacttctcctgttgggcagctcctgccagagggtacaactactgaaacggag
ttaagaaagagacgatctagttcttaccatgtttccatggatttgctggaagacccgaca
tcaaggcaaagagcaatgagtatagccagcattttgacaaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccttgctggtacaagtttgctaacatgtgcttaatctgg
gactgctgtaaaccatggttgaaagtgaagcatatcgtcaacctggttgtgatggaccca
tttgtggacctggccatcaccatctgcattgtcttgaatacactcttcatggccatggag
cactacccaatgacggagcactttagcaatgtgctgtctgttggaaatctggtcttcact
gggatcttcacagcagaaatggtcctcaagatcattgctatggatccatattattacttt
caagaaggctggaacatatttgatggctttattgtgagccttagcttaatggaacttggc
ttggcaaatgtggaaggattatcagttctgcgatcattccggctgcttagagtcttcaaa
ttggcaaaatcgtggcccacgctgaacatgctaataaagatcatcggcaactccgtgggg
gcgctgggaaacctcaccttggtgttggccatcatcgtcttcatctttgctgtggtcggc
atgcagctcttcggtaagagctacaaagaatgcgtctgcaagattgccaatgattgtaaa
ctccctcgctggcacatgaacgacttcttccactccttcctcatcgtgttccgcgtgctg
tgtggagagtggatagaaaccatgtgggactgcatggaggtggctggccagaccatgtgc
cttaccgtcttcatgatggtcatggtgattggaaacctcgtggttctcaacctctttcta
gccttgctgctgagttccttcagttctgacaaccttgctgccactgatgatgataatgaa
atgaataacctccagattgctgtgggaaggatgcagaaaggaattgattttgtgaagaga
aaaatacgtgaatttattcagaaggcatttgtgagaaagcagaaagcattagatgagatt
aaacctcttgaggatctaaataacaaaaaagacagttgtatttccaaccacactaccata
gaaataagcaaagacctcaactgtctcaaagatggaaatggaaccaccagcggcataggc
agcagtgtagaaaagtatgttgttgatgaaagtgactacatgtcgttcataaacaacccc
agcctcacggtgacggtgcccattgctgtaggagagtctgactttgaaaatttaaacacc
gaagagttcagcagtgagtcagatatggaggaaagcaaagagaaactaaatgcaactagt
tcatctgaaggcagcacagttgatataggggctcccgctgagggagagcaacctgaggtt
gaaccagaagaatctctcgaacctgaggcctgttttacagaagactgtgtacggaagttc
aagtgctgtcagataagcatagaagaaggcaaagggaagctctggtggaatctgaggaaa
acgtgctacaagatagtagagcacaattggtttgaaactttcattgtcttcatgattctg
ctcagtagtggagctctggcctttgaagatatttatattgaacagcgcaaaaccatcaag
accatgttagaatatgccgacaaagttttcacttatatcttcatcttggaaatgcttcta
aagtgggttgcatatggttttcaaatgtattttacaaatgcctggtgctggctggatttc
ctaattgtggatgtttcattggtcagcttaactgcaaatgccttgggctactcagaactt
ggtgccatcaaatcgctcaggacactaagagcgctgagaccactgagagctttatcccgg
tttgaaggaatgagggtggttgtaaacgctcttttgggagccattccatccataatgaat
gtccttctggtctgcctgatcttttggctaatattcagtatcatgggagtgaatctcttt
gctggcaagttttatcattgcattaattataccactggagagatgtttgatgtaagtgtg
gtcaacaactacagtgaatgtaaagcactcatagacagcaatcaaactgccaggtggaaa
aacgtcaaagtaaactttgataacgttggacttggatatctttctctgcttcaagtagcc
acttttaagggatggatggatattatgtatgcagctgttgactctcgaaatgtagaatta
caacccaaatatgaagacaatttgtacatgtatctttattttgtcatctttattattttt
ggttcattctttactttgaatctttttattggtgtcatcatagataacttcaaccaacaa
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaaaaaaccacaaaaacccattcctcggcctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtcttcgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagacagatgaccagagtcaagaaatg
accaacatcctatactggattaacctggtattcattgttctgttcactggagagtgtgtg
ttgaaactcatatccctgcggtattattacttcaccatcggatggaatatttttgatttt
gtggtggtcattctctccattatggggaatgtcttactgacattgatagcagaatggttc
tttcagatgctgaggacctctatgggagggaaggaggggagagcctgtgatgatgatgta
tttgtgtcaacaggactcccacaggaggtctatgccaaactgactgtttttacaaatgta
tacttaaggtcagtgcctataacaagacagggacccctggtcagaaactggaactcaaga
aaccagagaagcagcaccagtaggaggtttctgtttgcggaaccagctgaagctgctgga
gagcagagaggagtggctactcagaatacaggagccagtggaaaggcgggggagggaagt
taa
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