Dipodomys ordii (Ord's kangaroo rat): 105994098
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Entry
105994098 CDS
T07834
Symbol
Scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105994098 (Scaf4)
03041 Spliceosome [BR:
dord03041
]
105994098 (Scaf4)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105994098 (Scaf4)
Spliceosome [BR:
dord03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
105994098 (Scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105994098
NCBI-ProteinID:
XP_012882970
UniProt:
A0A1S3G2T1
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPLTVKVSSEPPQATPNSIPAVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTAAVAPVVPAVAAPPAPTVT
APAAAVAAAAAAVAAATAPAPPSAIPAATSPPPQAPFGFPADGMQQPAYAQHQNMEQFQT
RMMGMQQDPMHHQVPLPPNGQMPGFGLLPAPPFPPMAPPVIPPTPPVQQSFQPSFQAQNE
PLAQKPHPQEMEVEQPCIPEVKRHMPDNRKSRSRSASRSPKRRRSRSSSRTRRSRHRRSR
SRSRDRRRHSPRSRSQERRDREKERERRQKGLPHIKSETASVCSTTLWVGQLDKRTTQQD
VASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNK
GIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQ
NGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQAGPPVVGALQPPTFTPP
MGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISI
PNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVT
QPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPP
HMMPRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQP
PQQQQQQQQQQPPPQPQPQQPPPSQQPPSAQQQPQQFRNENRQQFNSGRDQERFGRRSFG
NRVENDRERYGSRNDDRDSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRE
SRREKDESRGKEKSEVTNRAGGKAIEPPPSQVGTVDTVSELEKGEAKATVVKPSEEAPAE
ATSSVEPEKDSSSATETTR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgcctttaaccaggagctcttttcacttatggatatgaaacctcct
atttctagagcaaagatgattctcattactaaagctgctattaaagctattaagctttat
aagcatgttgttcaaatagtagaaaaattcatcaaaaagtgtaaaccagaatataaggtt
ccaggattgtatgtaattgattcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattttctaaaaatataactgctacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagtccgtgtgctaaatctttggcaaaaaaat
ggagtgttcaaaattgaaattatccagcctctcttggacatggcagcaggaaccagtaac
gcagccccagtagcagaaaatgttaccaataatgaaggctcacctccacttacagtaaaa
gtttcctctgaacctccacaagctactccaaactctatacctgctgtaccacagttgcct
agttctgatgcttttgctgctgtggctcaactttttcagacaactcaaggccaacagctt
cagcagatccttcagacttttcagcaaccaccaaaaccacagtctcctgctcttgacaat
gctgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
cctgaacaaaaagctgctttccccccacctgaacaaaagactgcatttgacaagaagctg
cttgacagatttgattatgatgatgagccagaagctgtagaagaatcaaaaaaagaggac
actgctgccgtcgctcctgtggttcctgcggttgcagcgccccctgcacctaccgtgact
gcacctgctgctgccgtggctgctgctgctgctgctgtggctgctgccactgctcctgcg
cctccttcagccataccagctgccacctctcctcctccacaggcaccatttggatttcct
gcagatggcatgcaacaaccagcatatgcacaacatcaaaatatggagcagtttcaaact
cgaatgatgggaatgcaacaagacccaatgcaccatcaggttccactccctccaaatgga
cagatgccaggatttggacttcttcctgcacctccgtttcctccaatggctccacctgtg
attcctcctacaccaccagtgcaacagagtttccaaccttcttttcaggcacaaaatgaa
ccacttgcacagaagccacatccacaggaaatggaagttgaacagccttgtattccagaa
gtcaagcgacatatgcctgataatagaaagtcaagatctaggtcagcatccaggtcacca
aaaaggaggcgatcgagatctagttctagaactcggaggtctcggcaccgacggtctcga
tctcggtccagggatagacgccgacattctcctcgctctcgatcccaagaaagacgggat
agagaaaaagagagagaacgtcgacaaaaaggtcttcctcatatcaaatcagaaactgca
agtgtttgtagtactacactctgggtgggacaactagacaaaaggactactcagcaggat
gttgccagtctcttggaagagtttggtccaattgaatcaattaatatgattcctcccagg
ggttgtgcctatattgttatggttcataggcaagatgcctatcgtgcccttcagaaactg
agccgcggaaactataaagtgaaccaaaaatccataaagattgcctgggccttaaacaaa
ggaataaaggcagattataaacagtattgggatgtagaacttggtgttacttatattcca
tgggataaagtcaaacctgaagaactggaaagtttttgtgaaggaggaatgttggacagt
gataccctcaacccagattggaaaggaatccccaagaagcctgagaatgaagtggctcaa
aatggaggagcagaaacctcacacacagagccagtgtccccgatacctaagcctttacct
gtgcctgtccctcctattcctgttcctgcacctataacagtgccacctccacaggtcccg
ccccatcaggcaggtcctccagtagttggagctctgcaaccacccactttcacgcctccc
atgggaattcctcctccaggttttggtcctggtgttcctcctcctccaccaccacctccc
tttttgcgtccgggatttaatccaatgcatttaccgccaggttttcttcctcctggaccc
ccacctcctataactccaccagtatccattcctcctcctcacactccaccaataagcatc
ccaaactctactatcgctggtataaatgaagacactacaaaagacttatctattggaaat
cccattccaacagtggtgtctggggctagaggaaacgctgagtctggtgacagtgtgaaa
atgtatggctctgctgtgccacctgctgcacccacgaatctgcccacccctcctgtaacc
cagcctgtttcacttcttggcactcaaggagttgcccctggtcctgtgattgggctccag
gcaccatctactggtcttctaggtgcacgacctggactaatcccactccagcgccctcca
ggaatgcctccaccacacttacagcgattccctttgatgccaccccgccctatgccacca
cacatgatgcccagaggcccaccaccaggaccaggaggctttgcaatgcctccaccacat
ggaatgaaagggcccttcccaccacacggcccctttgttaggcctggtggaatgccaggg
cttgggggccctgggccaggcccagggggtcctgaagacagagatggaaggcaacaacca
ccgcagcaacagcagcagcagcaacagcagcagcctccacctcagccacaaccacagcaa
ccaccaccatcacaacagccaccatcagctcagcagcagcctcagcaatttagaaatgaa
aacaggcagcagtttaattcaggtagagaccaagaaaggtttggaagaagatcattcgga
aatagggtggaaaacgaccgggaacggtatgggagccgtaatgacgatagagatagtaat
cgtgaaaggagagaatggggaagaaggagccctgaccgcgacaggcacagagacttggaa
gaaagaaatagacgctctagtgggcatcgagatagggagagagattctagagatagagag
tctcgcagagagaaggatgaaagccgagggaaggagaagtccgaggtgactaacagggca
ggtggtaaagccattgagcctccacctagccaagtgggaaccgtagacactgtttcagaa
cttgagaaaggggaggccaaggccacagtggtaaaaccctctgaagaggcacctgctgag
gctacctcatccgttgaacctgaaaaagattctagctcagcaacagagacaactcgctag
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