Dipodomys ordii (Ord's kangaroo rat): 105994258
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Entry
105994258 CDS
T07834
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03030
DNA replication
dord03410
Base excision repair
dord03420
Nucleotide excision repair
dord03430
Mismatch repair
dord03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105994258 (Pold1)
03410 Base excision repair
105994258 (Pold1)
03420 Nucleotide excision repair
105994258 (Pold1)
03430 Mismatch repair
105994258 (Pold1)
03440 Homologous recombination
105994258 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dord03032
]
105994258 (Pold1)
03400 DNA repair and recombination proteins [BR:
dord03400
]
105994258 (Pold1)
Enzymes [BR:
dord01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105994258 (Pold1)
DNA replication proteins [BR:
dord03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105994258 (Pold1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105994258 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
105994258 (Pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
105994258
NCBI-ProteinID:
XP_012883125
Ensembl:
ENSDORG00000014144
UniProt:
A0A1S3G389
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MDGKRRQGLGPEVPPKKARGGLWDMDEPPPSQFEEDLALLEEMEAEHRLREQEEEQLQQA
LEGTPDGQSPSTAVDPRWLRPSPPPLDPETEPLIFQQLEIDHYVGPARPLPGGPPPSRGS
VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGTEHLSELQRELSAAISRDQRGGAQ
LTGPPVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGVRVPGLGTPSF
APYEANVDFEIRFMVDTYIVGCNWLELPPGKYFLRPTEKATLCQLEADVLWTDVVSHPPE
GPWQRLAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEAEPFLRLALTLRPCA
PILGAKVQSYEREEDLLQAWATFVRNMDPDVITGYNIQNFDLPYLISRAQTLKVQSFSLL
GRVAGLRSNIRDSSFQSRQMGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHF
LGEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNAVEMARVTGV
PLGYLLTRGQQVKVVSQLLRQARCQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATL
DFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLAADQFIRTPTGDEFVKASVRKGLLPQILE
NLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVT
GFGRQMIEKTKQLVESKYTTDNGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADW
VSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVA
NLVTASLRRLLVDRDPEGAVAHAKDVISDLLCNRIDISQLVITKELTRATADYAGKQAHV
ELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQ
LAKPLTRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFATRRVCCIGCRTVLSH
QGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYM
RKKVRKDLEEQEQLLRRFGPPGPEAW
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggcaaggcctgggacccgaggtgcccccgaagaaggcacgaggg
ggcctctgggacatggatgagcccccgccatcccagtttgaggaggacttggcgctgctg
gaggagatggaggcggagcacaggctgcgggagcaggaggaagagcagctgcagcaggcc
ctggagggcaccccagatggccagtccccctcgacagctgtggatccccgctggctacgg
ccctccccacccccactggaccccgagacagagcccctcatcttccagcagctggaaatc
gaccattatgtgggtccagcacgacccctgccagggggacccccaccctcccgtggctct
gtgcctgtgctccgtgcctttggggtcaccgatgagggcgtgtctgtgtgctgccatatc
catggcttcgcaccctacttctatacccctgcacctcctggttttggcactgagcatctg
agtgagctgcagcgagagctgagtgcagccatcagccgggaccagcgcgggggcgcgcag
ctcaccgggccccccgtgctggccgtggagctgtgctcccgggagagcatgttcgggtac
cacggacacggcccctccccattcctgcgcatcaccctggccctgccccgcctcgtggca
cctgcccgccgcctcctggagcagggcgtccgcgtgccaggcctgggcacccccagcttt
gcgccctatgaggccaacgtggactttgagattcggttcatggtagacacatacattgtc
ggctgcaactggctggagctcccacctgggaagtacttcctgcggcctaccgagaaggcc
accttgtgtcagctagaagccgatgtgctgtggacagatgtggtgagccatccccccgag
gggccatggcagcgcctcgcgcccctgcgcgtgctcagctttgacatcgaatgtgcgggc
cgcaaaggcatcttccctgagcctgagcgggaccctgtgatccagatctgctccctgggc
ctgcgctggggtgaggcggagcccttccttcgcctggcgctcaccctgcggccctgcgcc
cccatcctgggtgccaaggtgcagagctatgagcgcgaagaggacctgctgcaggcctgg
gccaccttcgtccgcaacatggaccccgatgttatcacgggctacaacattcagaacttc
gacctcccctacctcatctcaagggcccagaccctcaaggtgcagtccttctccttgctg
ggccgcgtggctggcctccgctccaacatccgggactcctcattccagtcaaggcagatg
ggcaggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctgcag
gtgctgctccgggagtacaagctgcgttcctacacactcaatgccgtgagcttccacttt
ctgggtgagcagaaggaagacgtgcagcacagtatcatcactgacctacagaatgggaac
gagcagacacgccggcggctggccgtgtactgcctgaaggacgccttcctgccgctgcgg
ctgctcgagcggctcatggtgctggtgaatgctgtggagatggcgcgcgtcaccggcgtg
cccctgggctacctgctcacccggggccagcaggtcaaggtcgtgtcccagctgctgcgg
caggcgcggtgtcaggggctgctgatgcccgtggtgaagacggagggcggcgaggactac
acgggggccaccgtcatcgaacccctcaaagggtactacgacgtgcccatcgccacgctg
gacttctcctcgctgtacccatccatcatgatggcccacaacctgtgctacaccacactc
ctgcggcccggggctgcacagaagcttggcctggctgcagaccagttcatcaggacgccc
accggggatgagttcgtgaaggcatctgtgcggaaggggctgttgccccagatcctcgag
aacctgctcagcgcccgcaagagggccaaggctgagttggctcaggagacagatccactg
cgccggcaggtcctggacgggcggcagctggcactgaaagtgagcgccaactccgtgtac
ggcttcaccggggcccaggtgggcaagttgccatgcctggagatctcacagagcgtcacc
ggcttcggacggcagatgattgagaagaccaagcagctggtggagtccaagtacaccacg
gacaacggctacagcgccaatgccaaggtggtgtacggtgacacggactcagtcatgtgc
cggttcggcgtgtcctcagtggcagaggccatggccctggggcgtgaggctgctgactgg
gtatccggtcacttcccatcccccatccggctggagtttgagaaggtctatttcccctac
ctgctcatcagcaagaagcgctatgcaggtctgctcttctcctcgcgccccgacgcccac
gaccgcatggactgcaagggcctggaggctgtgcgcagggacaactgccccctggtggcc
aacctcgtcactgcctccctgcgccgcctgctcgtggacagagaccctgagggtgccgta
gcccatgccaaggacgtcatctcggacctgctgtgcaaccgcatcgacatctcacagctg
gtcatcaccaaggagctgacccgtgctacggcagactatgcgggaaagcaggcccatgtg
gagctggctgagaggatgaggaagcgcgaccccgggagcgcgcccagcctgggggaccgt
gtcccctacgtcatcatcggtgcagccaagggcgtggccgcctacatgaagtctgaggac
cccctgttcgtgctggagcacagcctgcccatcgacacgcagtactacctggagcagcag
ctggccaagccgctcacacgcatcttcgagcccatcctgggcgagggccgcgccgaggcc
gtgctgctgcggggcgaccacacacgctgcaagacggtgctcaccggcaaggtgggcggc
ctcctggccttcgccacgcggcgggtttgctgcatcggctgccgcacggtgctcagccat
cagggagctgtgtgcaagttttgccagccccgagagtcagagctgtatcagaaggaggtg
tcacacctgaatgccctggaggagcgcttttcccgtctctggacgcagtgccagcgctgc
cagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctacatg
cgcaagaaggtgcgcaaggacctggaggagcaggagcagctgctgcgccgcttcgggccg
ccggggcctgaggcctggtga
DBGET
integrated database retrieval system
