KEGG   Dipodomys ordii (Ord's kangaroo rat): 105994501
Entry
105994501         CDS       T07834                                 
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105994501 (Wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dord03019]
    105994501 (Wdr82)
   03036 Chromosome and associated proteins [BR:dord03036]
    105994501 (Wdr82)
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105994501 (Wdr82)
Chromosome and associated proteins [BR:dord03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     105994501 (Wdr82)
    COMPASS/SET1 complex (yeast)
     105994501 (Wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 EIF3I Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_IFT140_1st NBCH_WD40 MinC_C
Other DBs
NCBI-GeneID: 105994501
NCBI-ProteinID: XP_012883498
UniProt: A0A1S3G3W1
LinkDB
Position
Unknown
AA seq 350 aa
MRLLPEADLPQRLSGSSGLPTPPGGRKCRRPEVPSGSPPPEVGGAGPGRAGPGEGRRGAR
SLGVSPDRSGPLLPLPLGVTEFLDALGILSRPKRTLYSKKYGVDLIRYTHAANTVVYSSN
KIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQG
LMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFS
NDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKI
HVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaggctccttcccgaggccgacttgccccagcgactctccggaagttccgggcttccc
acgccgccggggggccggaagtgccgcagaccggaagtgccctcgggcagcccgcccccg
gaagtgggcggggccgggccgggccgggccgggccgggcgagggccgacgtggagctcgg
agcctgggagtctccccggatcgcagtggcccgctgcttcccttacccctaggtgttacc
gagtttctggatgctttgggcattctttccagaccaaagagaaccctgtacagtaagaaa
tatggcgtagacctcatcagatacacgcatgcagcaaacacagttgtttacagctctaac
aaaatagatgataccatacgttacttgtccttacatgacaacaagtatatcagatacttt
ccaggacatagcaaaagggtggtggccttgtccatgtcacctgtggatgacactttcatt
tctgggtctcttgataagaccatccgactctgggatctccggtctcctaactgccagggt
ctcatgcatctacagggcaagccagtttgttctttcgatccagaagggttaatttttgct
gcaggtgtcaactctgaaatggtcaaactttatgatcttcgttcttttgataagggaccg
tttgcgacctttaagatgcagtatgatcggacttgtgaatggacagggcttaaattcagc
aatgatggcaaactcatactcatctccaccaatggcagcttcattcgcctcatcgatgcg
ttcaagggtgtggtgatgcacacgtttgggggttatgccaacagcaaagctgtcacgctg
gaagcttcgtttactccagactcccagttcatcatgatcggttctgaagatggcaagatc
cacgtgtggaatggagagagtggcataaaagtagctgtattggatggcaaacacacaggc
cccattacctgtttgcagttcaacccgaagttcatgacctttgccagcgcatgttccaac
atggccttctggttgcccaccattgatgactga

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