Dipodomys ordii (Ord's kangaroo rat): 105994590
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Entry
105994590 CDS
T07834
Symbol
Smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03082
ATP-dependent chromatin remodeling
dord04714
Thermogenesis
dord05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105994590 (Smarcc1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105994590 (Smarcc1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105994590 (Smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105994590 (Smarcc1)
03036 Chromosome and associated proteins [BR:
dord03036
]
105994590 (Smarcc1)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105994590 (Smarcc1)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105994590 (Smarcc1)
PBAF complex
105994590 (Smarcc1)
GBAF(ncBAF) complex
105994590 (Smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
105994590
NCBI-ProteinID:
XP_012883636
Ensembl:
ENSDORG00000000578
UniProt:
A0A1S3G494
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MDRNVEMFMNIEKTLVQNNCLARPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASH
HIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSSDVDAEIEEPPIPEKPWK
VHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARK
RKHSPSPPPPTPAESRKKSGKKGQANLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVV
LPKNVNPKKDSENTPVKGGTVADLDEQDEEAITTGGKEDEDPSKGDQSRSVDSSEDNVTE
QTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQE
YLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPS
GLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWT
EQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQ
PVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEA
ARASGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEKMETDADGQQPEKAENKVENETDEG
EKPQDGENEQSSEKEQDSEVSEDTKSEEKETEENKELSDTCKERENDTGKKKVEHEISEG
NVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE
KEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQQHSQNPQQPHQHSGGPGLAPLG
ATGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQPMPGRMIPTVAANIHP
AGTGPAPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQPPPPADGVPPPPAPGPPASVTP
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaatgttgaaatgtttatgaatattgaaaaaacattggtgcagaacaattgt
ctggctagacccaacatctacctcattccagacattgatctgaagctggctaacaaattg
aaagatatcatcaaacgacaccagggaacatttactgatgagaagtcaaaagcttcccac
cacatttatccatatccttcctcacaagaggatgaagaatggttgagaccagtgatgaga
aaagataagcaggtattagtgcactggggtttttacccagacagctatgatacttgggtc
catagtagtgatgttgatgctgaaattgaagagccaccaattccagaaaaaccctggaag
gttcatgtaaaatggattttggatactgatattttcaatgaatggatgaatgaggaggat
tatgaagtagatgaaaacaggaaaccagtgagctttcgtcagcgaatttcaacaaaaaat
gaagagccagtcagaagtccagaaaggagagatagaaaagcatcagctaatgcaagaaag
aggaaacactccccttcaccaccacctcccacacctgcagaatcacgaaagaagagtgga
aagaaagggcaagctaatctttacgggaagcgcagaagtcaaaaagaggaagatgagcaa
gaagatcttaccaaggacatggaggatccaactcccgtacctaatatagaggaagtggta
ctccccaaaaatgtaaacccaaaaaaagatagtgaaaatacacctgttaaagggggaacg
gtagcagatctagatgagcaggatgaagaagcaattacgacaggagggaaggaagatgaa
gatcctagcaaaggtgatcagagccggtcagttgactctagtgaagataatgtaacagag
cagaccaatcacattatcattcccagctacgcatcctggtttgattacaactgtattcat
gtgattgaacgccgtgcacttcctgagtttttcaatggaaaaaacaaatcaaagacacca
gaaatatacttagcatatcgaaactttatgattgacacataccgtctaaacccccaagag
tatttaaccagtactgcttgtcgaaggaacttaactggagatgtatgtgctgtgatgagg
gtgcatgcgtttttagagcaatggggacttgttaattatcaagttgatccagaaagtcga
cctatggcaatgggaccgcctcctactcctcatttcaatgtattggccgataccccctct
gggcttgtgcctctgcatcttcgatcaccacaggttcctgctgctcagcagatgttaaat
tttcctgagaagaacaaagaaaaaccaattgacttgcagaactttggtcttcgtactgac
atttactccaagaaaacattagctaaaagcaaaggcgctagtgctggaagggagtggacg
gaacaggagacccttctgctcttagaggctctggaaatgtacaaggatgattggaataaa
gtatccgaacatgtgggaagtcggactcaggacgaatgcatccttcactttttgaggctt
cccattgaagacccatacctggagaattcagatgcttcccttggcccgctggcctatcag
cctgtccccttcagccagtctggaaaccctgtcatgagtactgttgcttttctggcatct
gtggtggaccctcgtgtggcttctgctgcagcaaaagcagcactagaggagttttctcgg
gtgcgagaagaggtaccactggaattggttgaagctcatgtcaagaaagtacaggaagct
gctcgtgcctctgggaaggtggaccccacctatggcttggagagcagctgtattgcaggc
acagggcccgatgagccagagaagctcgaaggatctgaagaggaaaaaatggaaacagat
gctgatggtcaacagcctgagaaggcagaaaataaagtggaaaatgaaacagatgaaggt
gaaaaaccccaggatggagaaaatgaacaaagcagtgagaaggaacaggatagcgaagtt
agtgaggacactaaatcagaagaaaaggagactgaagagaacaaggaactctctgataca
tgtaaagaaagagaaaatgataccggaaagaagaaagtagaacatgaaatttctgaagga
aatgttgccacagccgcagcagctgctcttgcttcagctgccaccaaagccaagcacctg
gctgctgtggaggagagaaagatcaagtccctagtagctctcctggttgagacacaaatg
aaaaaactagaaatcaaacttcgacattttgaagagctggaaactatcatggacagagag
aaagaagctctggaacaacagaggcagcaattgcttactgagcgccagaacttccacatg
gaacagctgaaatacgcggagttaagagcccgacagcaaatggagcagcagcagcagcat
agccaaaaccctcagcagccacaccagcactcaggaggacctggcctcgcccctcttgga
gcaacaggacacccaggcatgatgcctcatcagcagccccctccctaccctctgatgcac
caccagatgccaccacctcatccccctcagccaggtcagataccaggcccaggttctatg
atgcctgggcaacccatgccaggccgcatgattcccactgttgcagccaacatccaccct
gctgggactggccctgcccctcctggtatgcctccaatgcctggaaacatcttaggaccc
cgggtacccctcacagcaccgaatggcatgtatccccctccaccacaacaacaaccaccg
ccacctgcagatggggtccctccacctcctgctcccggtccaccagcctcggtcactcct
tag
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integrated database retrieval system
