Dipodomys ordii (Ord's kangaroo rat): 105994661
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Entry
105994661 CDS
T07834
Symbol
Ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dord03037
]
105994661 (Ushbp1)
Cilium and associated proteins [BR:
dord03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105994661 (Ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
105994661
NCBI-ProteinID:
XP_012883745
UniProt:
A0A1S3G4Z8
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All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSVRATRPRSRRGRPAPPGELDPVAESSEEAEAAGSNTRRSADAVREEARPQPLEPGAEA
SDQGLGDGADGDPDGDAGGVPCPEGPQEPPAAAQQPPEADPADGGAEPTGPGAPDVFHTL
QQALSSLEAAAAAWRLKTPHTFQVQELQETLRRVRSSPPGSPGGPGSDSSSSGADTEPWG
ARGSSSVSSLLRLRDSSSQILGPVSMPVCGPAEKLLEGRVEQLHGNMEKLKCFNRLLLAA
LRGWKGRCEELSLHVGRRAAEATALGLALHYSESCEAAYGALLALREADPARRTPRPKAE
LQRAAEEARRLLAAVDGGTPPHSPEGSSADKPRPQEVATQLQAHIQRLQERRALLKIPEP
SPSAAARLTAPHGEAMVQAILETQPSPALPQLEKTQIQQGLMATRETLADLMLQLQLVRR
EKRGLELREAALRAQGPAHVLLLEQLQWERPVPWGTPPAGSPPARGPFGLALPVPGSWQP
GLPARGRALPRPASPTRPCASFPGSLSTQCPTRTPVTSWPRPQPEFTSSWKPPGWLRPEL
PPRRFRALLRVRAEAPSSTLLPAGPPASLAVSPQGLPALPGGEEGRDPQKLSQELAASLA
RSRGLRQQLQSLRERLEQMARRGRASRAQSAELHRDLCRAHSALVLAFRGAHRKQEEQRR
KLEQQLARLEARQAGELARLEAATPSRTLPTAADPEPSIQKVLGPGTLHPAPEGSPPP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagagccacgcggccccggagccgtcgagggagaccggctccaccgggtgaa
ctcgatcctgtggctgagagctcagaggaagccgaagcggccggcagcaacaccaggcgc
agcgcagacgcagtacgggaggaagccaggccgcagccgctggagcccggggccgaggcc
agcgaccaggggctgggggacggggctgatggggacccagatggagacgctggcggggtg
ccatgccctgagggaccccaggagccgcccgccgcagctcagcagccccccgaggcggat
ccagcggatgggggcgccgagcccaccgggccgggggcccccgatgtgtttcacaccctc
cagcaagcgctgagctccctggaggcggcggcggctgcctggcgcctgaaaactccacac
accttccaggtccaggagctgcaggagaccctgaggagggtgcggtcctccccgcccggg
tctcccggaggcccaggcagtgactccagcagctcgggggccgacacggagccctggggt
gctcggggctcctcctcagtttcctccctgctccggctgcgtgattccagctcccagatc
ctcgggcctgtgtccatgccggtctgtgggcccgcagagaagcttctggaaggccgggtg
gagcagctgcatgggaacatggagaagctgaagtgcttcaaccggctgctgctggcggcg
ctgcggggctggaagggccgctgcgaggagctcagcctgcacgtggggcggcgcgcggcc
gaggccacggcgctgggcctggcgctgcactacagtgagagctgcgaggcggcctacggg
gccctgctggcactccgagaggccgaccctgcccggcggaccccgaggcccaaagctgag
ctgcagcgggctgcggaggaggcacgcaggctgctggcggccgtggacggggggacaccc
ccgcacagccccgagggcagcagtgcggataagcccaggccacaggaagtcgccacccag
ctccaagcccatatccagcggcttcaggagcgcagggccctcctgaagatccccgagccc
agcccctccgcagcagcgaggctcaccgcgccccacggcgaagccatggtgcaggccatt
ctggaaacccagcccagcccggctctgccccagctggagaagacccagatccaacagggc
ttgatggccacgcgggagaccctggctgatctgatgctgcagcttcagctggtgcgcagg
gagaagcggggcctggagctgcgggaggccgcgctgcgggcccagggccccgcccacgtg
ctgctgctggagcagctgcagtgggagcgccccgtcccttggggcaccccgcccgcggga
agccccccagcgcgcggcccctttggcctcgccctcccggtcccgggctcctggcagcct
gggctgccagctagagggcgtgcgctgccgcgcccggcctctccgacccggccgtgcgcc
agcttccccgggtctctgtccacgcagtgcccaacccgaacgccagtcacttcctggcca
cgtccccagcccgaattcacctcctcctggaagccccccggctggctgcggccggagctg
cccccacggcggtttcgggctcttctcagagtgagggcagaggctccatccagcaccctg
ctgcccgctgggcctcccgcctcccttgctgtgtccccgcagggtctccctgccctcccg
gggggtgaggaaggtcgggacccacagaagttgtcccaggaactggctgcgtccctcgct
aggtcccggggcctccggcagcagctgcagtccctccgggagcgcctggagcagatggcc
cgcaggggccgagccagccgcgctcagagcgccgagctgcaccgggacctgtgccgagct
cacagcgccctggtcctggccttccgcggggcccaccggaagcaggaagagcaacgccgg
aagctggagcagcagctggcccggctggaggcccggcaggccggagagctggcccggctg
gaggccgccacacccagccgcaccctccccacagcagccgacccagagcccagcatccag
aaggttctgggccccggcactctgcacccagccccagagggctccccgcccccttga
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