Dipodomys ordii (Ord's kangaroo rat): 105994667
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Entry
105994667 CDS
T07834
Symbol
Nwd1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dord04990
]
105994667 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
dord04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105994667 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_DCAF12
Beta-prop_EIPR1
DUF4062
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
105994667
NCBI-ProteinID:
XP_012883750
UniProt:
A0A1S3G502
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MGGSSVEERPQLWGRGLWRAGLRDGRELSAGQASAVGAELAGRGSGGGAGGRSEGRPRVW
TWTPRERPCCSVPTPKCKXFCQRHGLGFEVVDLRWGVREADVSDHTMTELCLEELSRCQE
TSIGPTFVGLLGDRYGPCPVPGLIEEREWEALAASLRARPRDLELVARRFQRDENTVPPT
YVLQEPDVGEARGPEEASLASVLQTGALEARRLGLLSQEQWHRYHRSVLEWELEVGVLRP
GAAARGVTVFLREIRDVDKHMLDECALLALDRLPDGCPDTGARGLLRRLKERLAEVHPEI
LQAHPLPWSRDLLNPKNKAHARYLRGLGEQFVASTRHQILAGLAARGAAPRDQAWLFEEL
RTVSVMGGSHGCGFPAWAEPPFPDCDEVSISAQRVAAGATAAASARHREVSVKGWKALRA
GPGQRTPDFLLNLLQEWSGFGLSEAELKDVLSLDDALLCEVYRAWTPPSRRLLRFPPLLW
VRLRRDLGLCLARRPAPADGGQLLTLAHRQLAEVVSMRYLPGPERAQRHSVLADFFSGAW
SQGAKKLITLPLVGVPLSLDRKVSPQPLWFSDSVANERRLQELPRHLLLAGRTRELRQDV
LGNVSWLACRALSGGAEALLDDLDLCTQHLRCPELGLIREAVRLSRPALELPGTEKSTLY
TELLARLLFFSKSHPALVGQLCQQAQSWLRACPHPVLVPLAGFLQPPGGPLQATLTGCHK
GITAMAWSQEQRLLVLGTHDGVVAVWQVEEERPVHFLPAHSGEVWCVRVFAQGTRAVSAS
TDHTLRLWGLLSGQQQLSIWDGGSANSTEPQTRSLHVDEAKQVLYLASGSKVSAWALETA
ALLFRVLGEASDPWLCAAWLAAPSWLLTVSRACVVSVWSAASGALQGKQRLSSIRGETPT
CAAPLHKQGTVVAGFSNGSVALISSKGDRLLEKLPEAVGLVEVSEDGSLLAAGFGKSVRI
FLADAQGFQRLLATDLRHEDAVETVVFGPKNNLIVTASRDALIQVWSLSEQGALLGLLDG
VGAPLGALVRAGALVVGASRWSSTFRAWDVSRARQRGACTPFPDRTGLTAVSHNGSYVYF
PGVGEKNQVTIWDLAEGEARGALDTSSEVRCLEVAEQTKLLFAGLVSGAVLVFPLDSTQD
VLCIPPPEARKAVNCMALSKDEERLAVAYDNMVLVLGVGPGDPCPVVDGPTFTFYTQLPD
TITTVAVLADCCVAYGMTHGGLFLYECASSKLCPLEAHASRVSCVEVSHGGQLAVSGSEE
GLLCLWDLGTCQCKVEMSYMGSIIRGVQCVCFSQDDKYVFSAWRDGSVLVWRALDGSLLT
VQFVHAVVNRIIPTANGFLAPTRQGRLIRVRFQCPAASASPQDALQNFQKAVWMVKTRRR
EELAAGAGSAQDPSSEAPEKETNPNKRSQVCLLL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggagctcagtggaggagaggcctcagctgtgggggcggggcttgtggagggcg
gggctccgcgatgggcgggagctcagcgcaggacaggcctcagctgtgggggcggagctt
gcggggcggggctccgggggcggggctggcggcaggtcagagggcaggccccgggtgtgg
acatggacaccgagagagaggccttgctgctcagtgcctaccccgaagtgcaagnccttc
tgccagaggcatggcctgggctttgaggtggttgatctgaggtggggtgttcgggaagca
gatgtctcggaccacaccatgactgaactctgcctggaggaactcagccgatgtcaggaa
acatccatagggcccactttcgtcggcctgctgggtgaccgctacggcccgtgccctgtc
ccagggctgatcgaggagcgggagtgggaggcgctggcggcctccctgcgcgcccggcct
cgggacctggagctggtggctcgccgcttccagagggacgagaacacggtgccgcccacc
tacgtcctgcaggagccggacgtgggcgaggctcgggggcccgaggaggcctcgctggcc
tctgtcctccagaccggtgcgctggaggcccggaggctgggcctcctcagccaggagcag
tggcatcgctaccatcggtcagtcctcgagtgggagctggaagtcggggtgctgcggccc
ggggcggcggcacggggggtcaccgtgttcctgcgggagatccgggacgtcgacaaacac
atgctggacgagtgtgcgctcctggcgctggaccgcctgcccgacggctgcccggacacg
ggggcccggggcctcctgcggcgcctcaaggaacgcctggcggaggtgcaccccgaaatc
ctccaggcccaccccttgccgtggagccgggacctgctgaaccccaagaacaaggcccac
gcccgctacctccggggcctgggcgagcagttcgtggccagcacccgtcaccagatcctg
gcggggctggcggcgcggggcgcggcgccccgggaccaggcctggctcttcgaggagctg
cgcacggtctcagtcatgggtggaagccacggctgtggcttcccggcctgggcagagccg
ccatttccagactgcgacgaagtatccatcagtgctcagcgcgtggcagcgggcgccaca
gctgccgcttcagccagacaccgggaggtgtcagtaaagggctggaaggcgctcagggct
ggtcctggtcaacgcaccccagattttctgttgaacctgttgcaggagtggtctgggttc
gggctgtcggaggcagagctgaaggatgtgctgtccctggatgacgcgctgctgtgcgag
gtgtaccgggcctggacgccgcccagccgccggctgctgcgcttcccgcccctgctctgg
gtgcggctgcggagggatctgggcctctgcctggcccggaggcccgcgcccgcggacggc
ggccagctcctcaccctcgcccacaggcagctggctgaggtggtgagcatgcgctacctg
ccggggcccgagagagcccagaggcacagcgtcctggctgatttcttttcgggtgcctgg
agccagggcgccaagaagctcatcaccctgccgcttgtgggggtacccctgagcctggac
cgcaaggtgtccccgcagccgctgtggttctcggactccgtggccaatgagcggcggctg
caggagctgccccgacacctgctgctggcgggccgcacgcgggagctgcgtcaggacgtg
ctggggaacgtgagctggctggcgtgccgggcgctctcggggggtgcagaggcgctgctg
gacgacttggacctctgcacccagcacctccgctgccccgagctcggcctgatccgcgag
gccgtgcggctgagccgccccgcgctggagctcccaggcaccgagaagagcacgctgtac
acggagctcctggcgcgcctccttttcttctccaagtcccaccccgcgctggtggggcag
ctgtgccagcaggcccagagctggctccgtgcgtgcccgcaccccgtgctggtgcctctg
gccggcttcttgcagccccctggaggccccctgcaggccaccctcaccgggtgccacaag
ggcatcaccgccatggcgtggagccaggagcagcggctgctggtgcttggcacgcacgac
ggtgtggtggccgtgtggcaggtggaagaggagcgcccggtccacttcctccccgcacac
tcaggcgaggtgtggtgcgtgcgggtgttcgcgcagggcacccgcgcggtctctgcctcc
acggaccacacgctgcgcctgtggggtctgctgtccggccagcagcagctcagcatctgg
gacggaggctcagcaaactccaccgagccccagacccggagcctccacgtggacgaagca
aagcaagtcctgtacttggcgtcggggtcaaaggtcagcgcgtgggcgctggagacggcg
gcgctgctgttccgtgtcctgggcgaggcctcggacccctggctgtgcgcggcctggctg
gcggccccctcgtggctgctgaccgtgtcccgggcctgcgtggtcagcgtgtggagcgca
gcctcgggcgcgctccagggcaagcagcgtctgagcagcatccggggagagacccccacg
tgcgccgcacccctccacaagcagggcaccgtggtcgctggctttagcaacggctctgtc
gccctgatttcctcgaagggagacagattgctggagaagcttccagaagctgtgggcttg
gtagaggtgtcggaagacggatctctcctggctgcaggtttcgggaaatctgtgcggatc
tttctggctgacgcccagggtttccagcgactcctggcgaccgacctgcgacacgaggac
gcagttgagacagttgttttcggtcctaagaataacctgattgtcactgcatcacgcgat
gccctcattcaggtgtggagcctctcggaacagggcgcgctgctgggcctcctggacggt
gtgggggcgccactgggcgcgctggtccgggcaggggcgctggtggtcggggcctcgcgg
tggtcttccacctttagggcctgggatgtcagccgggcccgccagcgcggggcctgcacc
cccttcccggaccgcacggggctcacggccgtgtctcacaacggaagctacgtctacttc
cccggagtcggcgagaaaaaccaagtcaccatctgggacctggcggagggtgaggcgcgc
ggcgcgctggacacgtccagtgaggtccggtgtctggaggtggccgagcaaaccaagctc
ctgttcgcggggctggtttcgggggccgtgctggtgttccccctcgactccacgcaggat
gtcctgtgtatcccgccccccgaggcccggaaggccgtcaactgcatggcgctgagcaag
gacgaggagcggctggccgtggcctacgacaacatggtcctggtgctgggcgtcgggccc
ggggacccctgcccggtcgtcgatggccccacgttcaccttctacacccagctccccgac
accatcaccaccgtggccgtgctggccgactgctgcgtggcctacggcatgacccacggc
ggcctcttcctgtacgagtgtgccagttccaagctgtgcccgctggaggcccacgccagt
agagtctcgtgcgtggaggtcagccacggggggcagctggcggtcagcggctccgaggaa
ggcctgctgtgtctgtgggacttgggcacctgccagtgcaaagtggagatgagttacatg
ggctccatcatcaggggtgtccagtgcgtgtgcttctcccaagatgacaagtacgtgttc
tcagcctggagggacggctcagtcctcgtgtggagagcactggatggctctctgctgaca
gtccagttcgtccacgccgtggtgaacaggatcatccccacggccaacggtttcctggct
cccaccaggcagggccggctcatccgggtgcggttccagtgcccagcagccagcgcctcg
ccgcaggatgccctgcagaacttccagaaggccgtgtggatggtgaagaccaggaggaga
gaagagctggcggccggtgcgggatcagcccaggaccccagctcagaggccccggagaag
gaaacaaaccccaacaagcgctcacaagtgtgcctgctgctgtag
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integrated database retrieval system
