Dipodomys ordii (Ord's kangaroo rat): 105994854
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Entry
105994854 CDS
T07834
Symbol
Pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03250
Viral life cycle - HIV-1
dord03272
Virion - Hepatitis viruses
dord04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105994854 (Pdcd6ip)
03272 Virion - Hepatitis viruses
105994854 (Pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105994854 (Pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105994854 (Pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dord04147
]
105994854 (Pdcd6ip)
Membrane trafficking [BR:
dord04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
105994854 (Pdcd6ip)
Exosome [BR:
dord04147
]
Exosomal proteins
Proteins found in most exosomes
105994854 (Pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
Ly49
Motif
Other DBs
NCBI-GeneID:
105994854
NCBI-ProteinID:
XP_012883941
Ensembl:
ENSDORG00000013384
UniProt:
A0A1S3G551
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MATFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALEMLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYV
NVKDFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLF
EKMVPMSVQQSLAAFNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQ
SILTKSTSVVEQGGIQTVDQLIKELPELLQRNREILDVSLKLLDEEEATDNDLRAKFKDR
WQRTPSNDLYKPLRAEGTNFRTVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLTNLDEVKKDRESLENDLKSVNFDMTSKFLTALAQDGVIN
EEALSVTELDRIYGSLTNKVQESLKKQEGLLKSIQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILLRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPTPAYQSSPAGGHATVPPTPAPRSMPPAKPQPPARPPPPVLPANRAPPASAPP
PVGVGTAAPAPSQTSGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNVYTYGFNMPYPPV
YHQSPGQAPYPGPQQPSYSFPQPPQQSYYPQQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcatttcggtgcagctgaaaaagacgtcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggccgaggagctcagcaagctgcggcgcgccgcgctcggccgcccgctcgacaag
cacgagggcgcgctcgagatgctgctgagatattatgatcaaatttgttccattgaacct
aagttcccattttctgaaaaccagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatcagtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtcttattcaattgtgcagccttagctagccagattgcagcagaacagaacctg
gataatgatgaaggattaaaaatcgctgctaagcattaccagtttgctagtggtgccttt
ttacatattaaagagacggttttatctgccttaaatcgagaacctactgtggacatatct
ccagacactgttgggaccctcagtcttattatgctggcacaggcccaagaagtttttttt
ttaaaagccacaagagataaaatgaaagatgccattatagctaaattggctaatcaagct
gctgattactttggtgatgctttcaaacagtgtcagtataaagatacactccccaagtat
ttttatttccaggaggtgttccctgtcctggcggccaagcactgcatcatgcaggccaat
gctgaataccaccagtctatcctggcaaaacagcagaagaaatttggggaagagattgca
aggttgcagcatgctgcagaattaatcaagacagtggcatctcgctatgatgaatatgtc
aatgtgaaggatttttctgacaagatcaaccgtgcccttactgcagcaaagaaggataat
gacttcatttatcatgatcgagttccagaccttaaagatctagatcctattggcaaggcc
acactagtcaaatctaccccagtcaatgtacccatcagccagaagtttactgatttgttt
gagaagatggtcccgatgtcagtgcagcagtctttagctgcatttaatcagaggaaagct
gatttggttaacagatcaattgctcaaatgagagaagctaccactttggcaaatggggtg
ttagcttccctcaatcttccagcagcgattgaagatgtgtctggagatactgtacctcag
tccatattgaccaagtccacatctgtcgttgaacagggaggcatccaaactgttgatcag
ttgatcaaagaattacctgaactattgcaaagaaatagagaaatcctagatgtgtcacta
aaattgttggatgaagaagaagcaactgataacgacttaagagcaaaatttaaggatcgc
tggcaaaggacaccatccaatgacctttacaaacctttaagagcagaggggaccaacttc
agaacagttttagacaaagctgtacaagcagatggccaagtgaaagaacgttatcagtct
catcgtgataccattgcacttttgtgtaagccagagcctgagctgaatgctgccatcccc
tctgctaacccagcaaagaccatgcagggcagcgaggtggtaaatgtcttaaagtcttta
ttgacaaaccttgatgaagtgaagaaggatagagaaagtcttgagaatgacctgaaatca
gtaaattttgacatgacaagcaagtttttgacagcactggctcaagatggtgtgataaat
gaagaagcgctttctgttactgaactggatcgaatctatggcagtcttacaaataaagtc
caagaatctctaaagaaacaggagggacttttaaaaagtattcaggtctcacatcaagaa
ttttcaaaaatgaaacaatctaacaatgaagctaatttaagagaagaagttttgaagaat
ttagctactgcatatgacaactttgttgaacttgtagctaatttgaaagagggcacaaag
ttttacaatgagttgactgaaatcctactccggttccagaacaaatgcagtgatatagta
tttgcacgcaaaacagaaagagatgaactcttaaaggatttgcagcaaagcattgccaga
gaacctagtgctccttcaattcctactcctgcatatcagtcctctccagcagggggacat
gcgacagttcctccaacaccagctccaagaagcatgccgcctgccaagcctcagcctcca
gcccggcctccacctcctgtgcttccagcaaatcgagcacctcctgcttctgctccgcct
ccagtgggggtggggactgctgcaccagctccatcacagacttctggctcagcacctcct
cctcaggcccagggaccaccctatcctacctatccaggatatcccgggtattgccaaatg
cccatgcccatgggctataatgtctacacatacgggtttaacatgccatatccaccagtg
taccaccagagccctggacaggctccatacccaggaccccagcagccttcatactccttc
cctcagcccccacagcagtcctactatcctcagcagtaa
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