KEGG   Dipodomys ordii (Ord's kangaroo rat): 105995282
Entry
105995282         CDS       T07834                                 
Symbol
Ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03420  Nucleotide excision repair
dord04120  Ubiquitin mediated proteolysis
dord05161  Hepatitis B
dord05170  Human immunodeficiency virus 1 infection
dord05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105995282 (Ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    105995282 (Ddb1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    105995282 (Ddb1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    105995282 (Ddb1)
   05161 Hepatitis B
    105995282 (Ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dord04121]
    105995282 (Ddb1)
   03400 DNA repair and recombination proteins [BR:dord03400]
    105995282 (Ddb1)
Ubiquitin system [BR:dord04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     105995282 (Ddb1)
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105995282 (Ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105995282 (Ddb1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 105995282
NCBI-ProteinID: XP_012884444
Ensembl: ENSDORG00000000127
UniProt: A0A1S3G857
LinkDB
Position
Unknown
AA seq 953 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAGLWPLRSDPSRETDDTLVL
SFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV
SEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG
DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG
DGALFYFGLNIDTGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV
FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQ
EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVE
VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR
IVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN
NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG
AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS
VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG
FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgtcgtacaactatgtggtaacggcacagaaacccaccgccgtgaacggctgcgtgacc
ggacattttacttcagcagaagacttgaatctgttgattgccaaaaacacaagattagag
atctatgtggtcactgcagaggggcttcggccagtcaaagaggtgggcatgtatgggaag
attgcagtcatggagcttttcaggcccaagggggagagcaaggatctgctgtttatcttg
acagctaagtataatgcctgcatcttggagtataagcagagtggagagagcattgatatc
attacacgagcccatggcaatgtccaggatcgtattggccgcccctcagaaactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggtcttttc
aaagttattccactggaccgtgacaataaagagctcaaggcatttaacatccgcctggag
gaattgcatgtcatcgatgtcaagttcttgtatggttgtcaagcgcctaccatatgcttt
gtctaccaggaccctcaggggcggcatgtaaaaacctatgaggtgtctcttcgagaaaag
gaattcaataaaggcccttggaaacaggaaaatgtagaagctgaggcttccatggtgatt
gcaggcttatggccactgcgatctgaccctagccgtgagacggatgacactttggtgctc
tcttttgtgggccagaccagagtcctcatgctaaatggagaggaagtggaggaaactgaa
ctgatgggttttgttgatgatcagcagactttcttctgtggaaatgtggctcatcagcaa
cttatacagatcacatcagcatctgtgaggctggtctctcaagagcccaaagctctggtc
agtgagtggaaggagccccagggcaagaatattagcgtagcctcctgcaacagcagtcag
gtggtggttgctgtaggaagagccctctactacctgcagatccatccccaggagctacgg
cagatcagccacacagagatggaacatgaagtggcctgcctagacatcactccattagga
gatagcaatggtttatccccactttgtgccattggcctctggacagacatctcagcccgt
atcttaaagctgccatcttttgaactgctgcacaaggagatgctgggtggagagatcatt
cctcgttccatcctgatgaccacttttgagagtagccactacttactttgtgccttggga
gatggtgccctattctactttgggctcaatattgacacaggcttgttgagtgatcgtaag
aaggtgaccttgggcacgcagcccacagtattgaggactttccgttctctctctaccacc
aacgtgtttgcttgctctgaccgccccactgtcatctatagcagcaaccacaagttggtc
ttctccaatgtcaacctcaaggaggtgaactacatgtgtcctctcaactcagatggctat
cctgacagcctggcactggccaacaatagcaccctcaccattggcaccattgatgagatt
cagaagctgcacattcgaacagttcccctgtatgagtctccgaggaagatctgttatcag
gaggtgtcccagtgcttcggggtcctctccagccgcattgaagtccaagacacgagtgga
ggcacaactgctctgaggcccagcgccagtacccaggctctgtccagtagtgtcagttcc
agcaagctgttctccagcagcaccgctcctcatgagacctcctttggagaagaggtggag
gtgcacaacctcctcatcattgaccagcatacctttgaagtgcttcatgcacaccagttt
ctacagaacgaatatgctctcagcctggtctcctgcaagttgggcaaagaccccaataca
tacttcattgtgggtacagctatggtgtatcctgaagaggcagagcccaagcagggtcgc
attgtggtcttccagtattcggatggaaaactacagactgtggctgaaaaggaagtgaaa
ggcgctgtgtattctatggtggagtttaacgggaagctccttgccagcatcaacagcacg
gtacggctgtatgagtggaccacagagaaggagctccgcaccgagtgcaatcactacaac
aacatcatggccctctacctgaagaccaagggtgacttcatccttgtaggtgacctcatg
cgctcagtgctgctgcttgcctacaagcccatggagggaaactttgaagagattgcccga
gattttaatcccaactggatgagtgcagtggaaatcttggatgatgacaatttcctgggg
gctgaaaatgccttcaacttgtttgtctgtcagaaggacagtgctgctactactgacgag
gaacggcagcacctacaagaggttgggctcttccatctgggcgaatttgtcaacgtcttc
tgccatggctctctggttatgcagaatctgggcgagacttctacccctacacagggctca
gtgctctttggcacagtcaatggcatgattgggctggtgacctcactgtcagagagttgg
tacaacctcctgttggacatgcagaaccgactcaataaagtcatcaaaagtgtgggcaag
atcgaacactccttctggagatcctttcacactgagcgaaagacagagccagctacgggc
ttcatcgatggtgacctgattgagagtttcttggatattagccgtcccaagatgcaagag
gtcgtggcaaacctacagtatgatgatggcagtggtatgaagcgagaggccacagctgac
gacctcatcaaggttgtggaggagctcactcggatccattag

DBGET integrated database retrieval system