Dipodomys ordii (Ord's kangaroo rat): 105995560
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Entry
105995560 CDS
T07834
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04010
MAPK signaling pathway
dord04020
Calcium signaling pathway
dord04721
Synaptic vesicle cycle
dord04723
Retrograde endocannabinoid signaling
dord04725
Cholinergic synapse
dord04726
Serotonergic synapse
dord04727
GABAergic synapse
dord04728
Dopaminergic synapse
dord04930
Type II diabetes mellitus
dord05016
Huntington disease
dord05020
Prion disease
dord05022
Pathways of neurodegeneration - multiple diseases
dord05032
Morphine addiction
dord05033
Nicotine addiction
dord05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105995560 (Cacna1b)
04020 Calcium signaling pathway
105995560 (Cacna1b)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
105995560 (Cacna1b)
04725 Cholinergic synapse
105995560 (Cacna1b)
04728 Dopaminergic synapse
105995560 (Cacna1b)
04726 Serotonergic synapse
105995560 (Cacna1b)
04723 Retrograde endocannabinoid signaling
105995560 (Cacna1b)
04721 Synaptic vesicle cycle
105995560 (Cacna1b)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
105995560 (Cacna1b)
09164 Neurodegenerative disease
05016 Huntington disease
105995560 (Cacna1b)
05020 Prion disease
105995560 (Cacna1b)
05022 Pathways of neurodegeneration - multiple diseases
105995560 (Cacna1b)
09165 Substance dependence
05032 Morphine addiction
105995560 (Cacna1b)
05033 Nicotine addiction
105995560 (Cacna1b)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
105995560 (Cacna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dord04040
]
105995560 (Cacna1b)
Ion channels [BR:
dord04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105995560 (Cacna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
105995560
NCBI-ProteinID:
XP_012884778
Ensembl:
ENSDORG00000011586
UniProt:
A0A1S3G7G7
LinkDB
All DBs
Position
Unknown
AA seq
1943 aa
AA seq
DB search
MTARAGPWCVVHVTVTCTRSCSHCKMLLTPMLTRTDPQFVASRMCSLSEDAAGECSLSER
LDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLR
TLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF
HKACFPNSTDADPVGDFPCGREAPARLCEGDTECREYWAGPNFGITNFDNILFAILTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAANKKSRNDLI
HAEEGEDRFTDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVTLNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCF
DFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKFNFQDETPTTNFDTFPAAI
LTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLA
NAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSS
VNSPESHCGLEASGVTSMGPVHTLPSTSLQKVEEQPEDVDNQRNVTRMGSQPSDPSTTVH
IPVTMTGPPGETAVAPSGNMDLESQAEGKKEAEADDMPRSGPRPIVPYSSMFCLSPTNLL
RRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMV
IKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELE
RDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPLVLKHSVDATY
EEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERAC
IDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEY
ELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETN
NFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLANRACDPYANASEC
GSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPA
ACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALI
RTALEIKLAPADEMTVGKVYAALMIFDFYKQNKTTRDQIHQAPGGLSQTGPVSLFHPLKA
TLEQAQPAVLRGARVFLRQKSATSLSNGGAIQTQETGIKESLSWGTQRTQDTLYEARAPL
ERGHSAEIPVGQAGALAVDVQMQNMALRGPDGEPQPGLESQGRAASMPRLAAETQPAPDA
SPMKRSISTLAQRPHGVHLCNAALDRPPPSQATHHHHHRCHRRRDKKQRSLEKGPSLSVD
IEGAPNSAAGPGLPAGEGPTGCRRERERKQERGRSQERRQPSSSSSEKQRFYSCDRFGSR
EPPQPKPSLSSHPTSPTAGLGTGPPAQGSGPVNGSPSLSTSGASTPGRGGRRQLPQTPLT
PRPSITYKTANSSPVHFAGAQSGLPAFSPGRLSRGLSEHNALLQREPLSQPLAPGSRISS
DPYLGQRLDSEASAHTLPEDTLTFEEAVATNSGRSSRTSYVSSLTSQPHPLRRVPNGYHC
TLGLSTGVRARHSYHHPDQDHWC
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacgagcagggccatggtgcgtggttcatgtcacggtcacttgcacacgctca
tgctcacactgcaagatgctgctcactcccatgctcacccgcacggacccgcagttcgtg
gcttcccggatgtgctccctgtctgaggatgcggctggtgagtgctccctgtctgagcgg
ctggatgatacggagccctattttatcgggatcttttgctttgaggcgggcatcaagatc
atcgctctgggctttgtgttccacaagggctcctacctgcggaatggctggaacgtcatg
gactttgtggtggtcctcactgggatcctcgccacggctgggactgacttcgacctgcgg
acgctgagggctgtgcgggtgttaaggccactgaagctggtgtctgggattccgagtctg
caggtggtgctcaagtccatcatgaaggctatggtcccgctgctgcagatcgggctgctg
ctcttctttgccatcctcatgtttgccatcattggcctcgagttctacatgggcaaattc
cacaaggcctgtttccccaacagcacagatgcagaccctgtgggtgacttcccctgtggc
agggaggccccggcccggctgtgtgagggggacacggagtgccgcgagtactgggcagga
cccaactttggaatcaccaactttgacaacatcctgtttgccatcttgacagtgtttcag
tgcatcaccatggagggctggacagacatcctctacaatacgaatgatgcggctggcaac
acctggaactggctgtactttattcctctcatcatcatcggctcctttttcatgctcaac
ctggtgcttggtgtgctgtcaggggagtttgccaaggagagagagcgggtagagaaccgc
cgcgccttccttaaactgcgccgtcagcagcagattgagcgagagctgaatgggtatctg
gagtggatattcaaggctgaggaagtcatgctggcagaagaggacaagaatgccgaggag
aagtcccctttggatgtgttgaagagagcagccaacaagaagagccgcaatgacctgatt
catgcagaggaaggagaggaccggtttacagacctctgtgcagtggggtccccctttgcc
cgagccagcctcaagagcgggaagacggagagctcgtcctacttccggaggaaagagaag
atgttccggttcttcatccggcgcatggtgaaggctcagagcttctactgggtggtgctg
tgtgtggtgactttgaacacactgtgtgtggccatggttcactataaccagccgcagagg
ctcaccacggcactgtactttgcagagtttgttttcctgggtctcttcctcacagagatg
tctctaaagatgtatggcttagggcctagaagctacttccggtcttccttcaactgcttt
gactttggggtcatcgtagggagcatctttgaagtggtctgggctgccatcaagccaggg
acctcctttggaatcagtgtgctgcgtgccctccgcctgctgaggatcttcaaggtcaca
aagttcaacttccaagatgagactccaacaaccaactttgacacctttccagctgccatc
ctcactgtcttccagatcctgactggagaggactggaatgcggtgatgtatcatgggatc
gagtcgcaaggtggagtcagcaaaggcatgttctcctccttttacttcattgttctgacg
ctgtttggaaactacaccctgctaaatgtctttctggccatcgctgtggacaacctagct
aacgctcaggagttaaccaaggatgaagaagagatggaagaagctgccaatcagaagctt
gctctacagaaggccaaagaagtggctgaagtcagtcccatgtctgctgccaacatttcc
attgctgcttttgtaaagcaaactcgaggtactgtatctcgcagctcatctgtctccagc
gtaaactcaccggagtctcactgtggccttgaggccagtggggtgacgagcatgggtcct
gtgcacaccctgcccagcacctctctccagaaggtggaggaacagccagaggatgtggac
aaccagcggaatgtcactcgaatgggcagtcaaccctcagaccctagcacaactgtgcac
atcccagtgacaatgacaggacctcctggggagactgcagtggctcccagtggtaacatg
gacctggaaagccaagcagaggggaagaaggaggcagaagctgacgacatgccaaggagt
ggcccccggcccatcgtcccatacagctccatgttctgtttgagccctaccaacctgctc
cgtcggttctgccattacattgttaccatgcggtactttgagatggtcattcttgtggtc
attgccttgagcagtattgccctagctgctgaggatccagtacggacagactccttcagg
aacaatgctctgaaatatatggattacatcttcacaggtgtctttacctttgagatggta
ataaagatgattgacttggggctactgcttcaccctggagcctacttccgggacctgtgg
aacattctcgacttcattgtggtcagtggggccttggtggcatttgccttctcaggatcc
aaagggaaagacatcaacaccatcaagtctctgagagtgctgcgtgtcctgcgacccctc
aagaccattaaacgactgcctaagctcaaggctgtgtttgactgtgtggtgaattccctg
aagaatgtcctcaacatcctcattgtctacatgctctttatgttcatatttgccgtcatt
gcagtacagctcttcaaagggaagtttttctactgcactgatgaatctaaggagctggag
agggactgcaggggtcagtacttggattatgaaaaagaggaagtggaagcccaaccaaga
caatggaagaaatatgacttccactatgacaatgtactctgggccctgttgacgctgttc
acggtgtccacaggagaggggtggcccttggtgttgaaacattctgttgatgccacctat
gaggaacaaggaccaagccctgggttccgcatggagctgtccatcttctacgtggtctac
ttcgttgtcttccccttcttctttgtcaacatctttgtagccttgattatcatcaccttc
caggagcagggggacaaagtgatgtctgagtgcagcctagagaagaatgagagggcttgc
attgactttgccatcagcgccaagcccctgacacggtacatgccccaaaacaagcagtcg
ttccagtataagacatggacgtttgtggtctcgcctcctttcgagtacttcatcatggca
atgatagccctcaacacagtagtgctgatgatgaagttctacgacgcaccttatgagtat
gagctgatgctgaaatgcctgaacatcgtgttcacgtctatgttctctatggaatgtgtg
ctgaaaatcatcgcctttggggtgctgaactacttcagagatgcctggaatgtattcgac
tttgttaccgtgttgggaagtatcactgatattttagtaacagaaattgcggaaacgaat
aacttcatcaacctgagcttccttcgcctcttcagagctgcacggctcatcaagttgctc
cggcagggctacaccatccgcattttgctgtggaccttcgttcagtccttcaaggcgctg
ccctacgtgtgtcttctcattgccatgctgttcttcatctacgccatcatcggcatgcag
gtctttgggaacattgcccttgatgatgacaccagcatcaaccggcataacaacttccgg
acgttcctacaagctttgatgctgttgttcagaagcgccacaggggaggcctggcacgaa
atcatgctgtcttgtctagccaaccgggcctgcgacccatatgccaacgccagtgagtgt
ggaagtgactttgcctacttttacttcgtgtccttcatcttcctttgttcctttctgatg
ttgaacctctttgtggctgtgatcatggacaattttgagtacctcacgcgggactcttcc
atcctagggcctcatcacctggacgagttcatccgtgtctgggctgagtacgacccagct
gcgtgtgggcgcatcagttacaatgacatgtttgagatgctgaaacacatgtctccacct
ctggggctggggaagaaatgcccggctcgagttgcatacaagcgcctggtccgcatgaat
atgcccatctccaatgaggacatgacggtgcacttcacgtccacgctgatggccctaatc
cggactgccctggagatcaaactggccccagctgacgagatgacagtggggaaagtctac
gcagctctgatgatattcgatttctacaaacagaacaaaaccaccagagaccagattcac
caagctcccggaggcctatcccagacgggccctgtgtccctgttccaccctctgaaggcc
accctggagcaggcacagccggctgtgctccgaggagctcgggttttccttcggcagaag
agtgccacttccctcagcaatggcggtgctatacaaacccaagagactggcatcaaggag
tccttgtcctggggcactcagaggacccaggacacactctatgaggccagggcccccctg
gagcgtggccactcagcagagattcctgtgggtcaggcaggagcactggctgtggatgtc
cagatgcagaatatggcgctgaggggccctgatggggagccccaacctgggctggagagc
caaggccgagccgcttccatgccccgcctggcagcagaaacgcagcctgcccctgatgcc
agccctatgaagcgctccatctccacactggcccagcgcccccatggggttcacctctgc
aatgctgccctggaccgtcctccccccagccaggcaacacatcatcaccaccaccgctgc
caccgtcgcagggacaagaaacagaggtccctggaaaaggggcctagcctctctgtggac
atagagggcgcaccaaacagcgctgccgggccaggcctgcctgcaggagaaggacctaca
ggctgccggcgggagcgggagcggaagcaggagcggggcaggtcccaggagcgcagacag
ccttcatcttcttcttcagaaaagcagcgtttctactcctgtgaccgctttgggagtcgg
gagcctccacagcccaagccctccctcagcagccaccccacatctccaacagcagggctg
ggcacaggcccccccgcacagggcagtggcccagttaatgggagcccttcactgtcaaca
tctggtgctagcactccgggtcgaggtgggcggaggcagctcccacaaacccctttgacc
cctcgccccagcatcacctacaagacggccaactcctcgccggtccactttgctggggct
cagagtggcctcccagccttctccccaggccggctcagccgcggcctttctgaacacaac
gccttgctccagagagagcccctgagccagcccttggctccgggctctcgcatcagctca
gacccttacctgggccagcgtctggacagcgaggcctctgcccacactctgcctgaggac
acgctcaccttcgaggaggcggtggctaccaactcaggccgttcctcgaggacttcctac
gtgtcctccctgacctcccagccccaccctctccgccgtgtgcccaatggctaccactgc
actttgggactcagcaccggtgtccgggcacggcacagctaccaccaccctgaccaagac
cactggtgctag
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integrated database retrieval system
