Dipodomys ordii (Ord's kangaroo rat): 105995647
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Entry
105995647 CDS
T07834
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105995647 (Sec16a)
Membrane trafficking [BR:
dord04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105995647 (Sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
105995647
NCBI-ProteinID:
XP_012884889
Ensembl:
ENSDORG00000015295
UniProt:
A0A1S3G9F6
LinkDB
All DBs
Position
Unknown
AA seq
2373 aa
AA seq
DB search
MQPPPQAIPSSMAGPPPAGNPRSMFWGGNSPYRRPASNNAPVAPITCPLPPVTDPFAFNR
QTRQHTPLGSSSKSSLPALHGSAFPVCSQWSGLPAPHTNAGDSSQGPHESLPGPMSHPRT
DASPFPTASIPSLLPGSEMSRSTEVSSVSGPEIQNPPYPLHYIPGVGPDPSHGRHLPESG
PGPDRPLNRHTPHDGVAAPSASSFFSQPSQQMPGQWAPAPGDSQTPRHHCLPSPEGLVQS
VGPQATSNSHFPSPSTVCPPAPSAGGEGNEVAHLRSGTHFLPQHTSRQNPRIGSPWASQE
FMQNPEVNKHLLDPALVNLLTQGNSPENQVHYPLGTGTSRAPLEASSGSLSMFFQGEEAE
NEENLSSEKASFAGRMDLDSFSSSPGLGHPLPPAHGAGGIYQAFLKGSNSETALQEVGAQ
PYFSPSTGIQHDKQTARNVAGDMWGDAASTGTLSAHGSQYENVENLEFVQNQEVLPSEPL
SLDSSSSNEHFRYGAPPGPGAPRPSAVGLTRGGGLHLEAPEVPLHPARSDSVSSSYSGHS
HRSPPGSTRPQELGSTFIQQEIGKPEDDSSGSFFKQIDSSPVGGETDETTGSQNYRSNLS
QPSTPSPPKPTGIFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRGTRDQQKKRRAAA
RMPDASPGNLEQPPDNMETLTAPQACPLPPHTTTAEAGHTLPHTGPPLDTMRPTPEKRPS
VRTQGAVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPAKPQPPEVVQPLAKGVSGQ
QLRKPGAAPPLQNQDGLGASENLENPPEVGEEEALPSQASSGYASLLSSPPTESLQNQPI
LIAQPDQSYNLAQPVHFSVSLVSPNEKTQSWGDAIVGDNAKGSNSQPPAGDSGDRAAVSG
VPANTATGLSLSNSTAPSSVPRGSGSSEMVSSQPACLLAQSLSYPVPKTPLAESQNHSAA
GVPPEFNSFAGSTGVTLVPPASSTLVPSNNEKADQCTNREETVGALDFTLNRTLENSGRM
YSSSFSDCPASQQTVANHPRQSGPGTHNADHFYQQVTKDAQDQRGVGKAQPELVPPQPQT
SPQVPQAPCSEPSNTESSSAQGRSQSSAQPSSPAPADTGQQLLPPPPQSSSASAVSTSSS
QAAPRSEQPWLHPPPPNAFGPPPADLASHYYYRPLYDAYQSQYPSLYLSDPGTASLYYQD
VYALYDPRYRPYDSSASAYTENYRYPDPERPSSRASHCSDRPTARQGYPEGYGNSRSGWS
SQSDYYANYYSSQYDYGDPGRWERYHGSRLRDTRVWDRRPWYDAEPDPYRKETYAYGDRL
EKCDDHWRYDPRFTGSFDDDTEPHKDPYGEEVDRRSVHSEHSARSLRSGHSLPSRRSSLS
SHSHQSQIYRSQNVTTGSFEAPPPSGSFHGDYAYGTYGSNIGTTHGFPEYGYPVDGTWPA
VEQVPSRPTSPEKFSVPHICARFGPGGHLIKVVPNLPSEGQPALVEIHSLETLLQHTPEQ
EEMRSFPGPLGKDDTHKVDVINFAQNKATKCLQNENLIDKESASLLWNFIILLCRQNGTV
VGTDIAELLLRDHRTVWLPGKSPHEANLIDFTNEAVEQAEEEESGEAQLSFLTDSQTATS
SSMLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSLP
INDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATMGDTL
ASKGLLDAAHFCYLMAQVGFGVYTKRTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQ
SLGAQTCLLPNFQVFKFIYSCRLAEMGLATQAFHYCEVIAKSILAQPAAFSPVLVTQLVQ
MASQLRLFDPQLKEKPEEESFVEPAWLVQLRCVERQIQEGAVLWNQDGADPQQCPSTPSS
EVEQLDGAGIGQPAGLGADNPLLMGSTEPLSQDVQLLPSAPQTLPDDQPAHPARVPMFPV
SLSRGPQELDPGYGSQGSALGLPEHARPDAAAPHLGLPLPPGALPHPESGPLRQETRSLD
PGVAPQDLPVRNSLPELSEEDFGGKLANLGTSRTAQGLENPPVWDYNSSASTQPAPALTP
TPEAKKPAQAVRKEVKEPKKSESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQWVNLN
EPEEEKKAPPPPPTSFPRAPQTAPIGPQGPPTASVNVFSRKAGGSRARYVDVLNPSGTQR
NEPALAPADLFAPLAPLPIPPNLLIPNPDAEEPQLADRAGSRGQAPAGAQPKPEPSPEAQ
ELSSSASAPGPELTPSRLDGSQGGELSRCSSMSSLSQEVSRHFHQATGDHGPAGAPPSGA
VPFYNPAHLAQASVNSGNSRLGRIGQRKYPVLN
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccaccccaggcaatcccatctagcatggctggtccccctccggccgggaat
cctcggagcatgttttggggtggcaacagtccttaccggaggccagccagtaataatgca
ccagtagctccgataacttgcccattgccgccagtaacagatccatttgcttttaataga
cagacgcgccaacacacacctttgggcagttcgtccaagagcagcctgcctgctttgcat
ggctcagccttcccagtgtgttctcagtggtctggtttgcctgcacctcacacaaatgct
ggggatagctcccaaggaccccatgagtctctgccaggacctatgtcacacccgagaaca
gatgccagtccgtttcctactgcatccatcccttcattgctgcctggatctgagatgagt
aggagcactgaggtcagttctgtctcggggcctgaaattcaaaatccaccatatcctctt
cactacattccaggagtgggtcctgacccatctcatgggagacatctgcctgagagtggg
cctgggcccgacagacctctgaatagacacaccccacatgacggtgtagcagccccatca
gcatcttccttcttctcccagcctagtcaacagatgccaggtcagtgggcgccagcgccg
ggagactcacagactccccggcatcactgtttgccctccccagagggacttgttcagagt
gtgggaccccaggccaccagcaattcccatttcccctctccgtccacggtgtgtccccca
gcaccctcggctgggggcgaagggaatgaggtggctcacctgcgaagtggaacacacttt
ctccctcagcatacatccaggcaaaatcccagaatcggaagtccgtgggcaagccaagag
ttcatgcaaaatccagaagtaaataagcatttgctagaccctgcccttgtgaatctgctc
actcagggaaatagcccagaaaaccaggtgcactatcccttggggactgggactagccgg
gctccactagaagcatcctcaggatctctctcaatgtttttccaaggagaggaggcagaa
aatgaggagaatctctcatccgaaaaagcaagctttgctggcagaatggacttggatagt
ttctcctctagtcctggactgggccatccgctcccgcccgcacacggagctggtggtatc
taccaggcctttctcaagggctccaacagtgagactgcactgcaggaagttggtgcacag
ccttatttttctccgtctaccggcattcagcatgataagcaaactgctagaaacgttgct
ggtgatatgtggggtgatgcagcaagcactgggactctcagtgctcatggctcacagtat
gagaacgtggaaaacttagagtttgttcaaaatcaggaggttctgccaagtgagcccctg
agtttggactcttcctcttcgaatgaacatttccgatacggagcccctcctgggccaggt
gcccccaggcctagtgctgtgggtctcaccagaggtgggggactgcatctcgaggcccct
gaagtgccactgcaccctgcacggtctgacagtgtgtcatccagctacagcggccacagc
cacaggagtcctccagggtcaacccggccccaagaattggggagcacgtttattcagcag
gaaatcggaaaacccgaagatgattcttcaggcagtttttttaaacaaattgactcttct
ccagtgggaggggagacagatgagactaccgggagccagaattaccgcagcaacctgtct
cagccctcaactccaagtcctcccaaacctacagggatatttcagacaagcgcaaatagt
tcttttgaaccagtaaaatctcacttagttggggtaaaaccagtcgaggcagatcgtgcc
aacatggtggttgaagtgaggggaacccgtgaccagcagaagaagcgcagagcagctgcc
aggatgcctgatgcctctccaggtaacctggagcagccaccagacaacatggagaccctc
actgcaccccaggcctgccccctgccgccacataccaccactgcagaagctggacacaca
cttccacatacagggccaccattggatactatgcgcccaacacctgagaagaggccctca
gtcaggacacagggagccgtgaagtgtgaaagcccagcaacaactctgtgggcacaaaat
gaactgccagattttggtggcaacgtcctgttagccccagctgcccctgcgctgtacgtg
cctgcaaaacctcagccgccagaagttgttcagcctctggcaaagggagtgtctgggcag
cagctgcggaagccaggtgctgccccacctctgcagaaccaagatggccttggtgcttcg
gaaaaccttgagaaccccccagaggtgggcgaagaggaggcccttccatcgcaggccagt
tctggttatgcaagtttgctgtcttcaccaccgaccgaatctttgcagaatcaacccatt
ctgattgcccagcctgaccaaagctataatttggctcagcctgttcatttttctgtgtct
ttagtgagtcctaacgagaagactcagtcttggggagatgccatagtgggggataatgcc
aaagggagtaacagccagcctcctgctggtgattctggagaccgtgctgcagtatctggt
gtcccagctaatactgccactggcttgtctctgtctaacagtactgcccccagcagtgtg
cctcgtggttctgggtcttctgaaatggtttctagccagcctgcctgtttgttggctcag
tcactgtcctatccggttccaaagactcctcttgcagaaagtcagaatcacagtgcagca
ggagttcctcctgagtttaatagctttgctggaagcacaggtgtgaccttagtcccgcct
gcaagcagtacattggtacctagtaataatgagaaggcagatcagtgcactaaccgtgaa
gaaacagttggagccctagacttcactctaaacagaactttggaaaattctggaagaatg
tatagctcatccttttcagactgcccagcttctcagcaaacagttgccaatcatcccaga
caatctgggcctggaacgcataatgcagaccatttctatcagcaggtgactaaagatgca
caggaccagcgtggtgtgggaaaagcccagccagagcttgtccctcctcagccacagact
tctccccaggtgccccaggcaccatgttcagaaccttccaatacagaaagttcatccgca
cagggacggtcccaaagctcagcccagccatcaagtccagctccagctgacacaggccag
cagctgctgcctccgccacctcagtcctccagtgcatcggctgtgtccaccagctcaagc
caggcagccccacgatcagagcagccctggctgcacccaccacctccaaatgcatttggc
ccaccacctgcagacctggcatcccactactattacagaccgttgtacgatgcctaccag
tcccagtacccctcactctatctatctgatcctgggacagcctccctgtattaccaggac
gtctacgccctgtatgatcctcgatacaggccctatgacagctcagcctccgcttacaca
gagaactaccgctacccagatcctgagcggcccagttcccgagcaagccactgctctgac
cggcccacagccaggcaagggtatcctgaaggatatggtaattccaggagtgggtggagc
agtcagagcgactactatgcaaattattactccagccagtatgattatggagacccgggt
cgctgggaacgttaccatggttccagactcagagatacccgtgtctgggaccgaaggccc
tggtatgatgccgagcccgacccatacaggaaggaaacctatgcttatggggacaggctt
gaaaagtgtgatgatcactggagatatgaccctcgcttcacggggagctttgatgatgac
actgagcctcataaggacccttatggggaggaggtcgaccgacgcagcgtccacagcgag
cactcagctcggagcctgcgcagtgggcatagtctgcccagccgccgcagcagcctcagc
tcacactcacaccagagtcagatttacagaagccaaaacgtgactactggttcctttgag
gccccgcctccttctggctcatttcatggcgattatgcctatggcacctatggcagcaat
atcggcactacccatggctttccagagtatggctatcctgttgacggcacctggcctgcc
gtggagcaagttccatcaagaccgacttctcctgagaagttttcagtgcctcacatctgt
gccaggtttggacctggtggtcacctcattaaggtggttcctaacctgccttcggaagga
cagcctgcactggttgagatccatagcttggagactttactgcagcacacacccgagcag
gaggagatgcgctccttccccggacctctcggcaaagacgacacccataaagtggatgtt
attaattttgcacagaacaaagctacaaaatgtttgcagaatgaaaacttgattgacaaa
gagtctgcaagtcttctatggaattttattattctgttgtgcagacagaatgggaccgtg
gtggggaccgacatcgcagagctattgttacgagatcataggacagtgtggcttcctggg
aagtcaccccacgaagccaacctcatagacttcactaatgaggctgttgaacaagcggag
gaagaggagtccggtgaagcgcagctctcattcctcaccgacagccagacagccaccagc
agcagcatgcttgagaaggaaaccgaacggttccgagagcttctgctctatggccgcaag
aaggatgctttggagtctgcaatgaaaaatggcttgtggggtcacgctctgctgcttgca
agtaagatggacagccggacacatgcccgtgtcatgaccaggtttgccaatagtcttcca
atcaatgaccctctgcagacagtctatcagctcatgtccgggcggatgcctgctgcatcc
acgtgttgtggagatgagaagtggggagactggaggccacatcttgctatggtgttatcc
aacctgaacaacaacatggatgtggaatccaggaccatggccacaatgggcgatacgcta
gcctccaaaggccttttggatgctgcacacttctgctacctgatggctcaagttggattt
ggggtttacacgaagagaaccacaaaacttgtcttgataggctcaaatcacagtttgcca
tttttgaagtttgccaccaatgaagccatccagaggacagaggcctatgagtatgctcag
tcccttggggcccagacctgcctcttacctaatttccaggtgttcaaattcatctattct
tgtcgcctggctgagatggggcttgccacccaggccttccactactgtgaagtgatcgcc
aagagtatcctggcgcagcctgccgctttctccccagtgctcgtcacccagctggtgcag
atggcttcccagttacgcctcttcgaccctcagctcaaggagaagccggaggaggaatcc
tttgtggagcctgcctggctggtacaactgcgatgtgtggagaggcagatccaggagggg
gctgtgctatggaaccaggacggagcagacccccagcagtgtcccagcacaccaagctct
gaggtagagcagttggatggtgcaggaattggccagccagcaggactgggagctgacaat
cccctactgatggggagcacggagcccctgagccaggacgtgcagctgctgccctcagct
ccacagacgctccctgatgaccagccagcccatcctgccagggtgccaatgttccctgtg
tcgctgtcccggggcccccaggaactagatcctggctatggatctcaaggatctgcactt
ggcctcccagaacatgccaggcctgatgctgcagctccgcatctgggattacccctgcca
ccgggggcactgccacacccagaaagtggccccctgcgccaggagaccaggagcctggac
ccaggagtggcaccacaggacttgcctgtcagaaattcccttccagagctaagtgaagag
gattttggtggaaaacttgctaatttgggcacctcaaggacggcgcagggcttggagaac
cccccggtttgggattataacagctcagcttcaacacagcctgctccagctctgacacct
actcctgaggcaaagaaacctgcacaggcagtcagaaaagaagtcaaggaaccaaagaag
agtgagtcctggttctctcgctggcttcccgggaagaaaaggacagaagcttatttgcca
gatgacaagaacaaatcaattgtttgggatgaaaagaaaaaccagtgggtaaatctgaat
gagccagaagaggagaagaaggcgccacccccacctccaacatcatttcccagggctcca
cagacagctcctattgggccccaagggcctcccacagcctccgtgaacgtgttttctaga
aaagcaggtgggtccagggctcgctacgtggatgttctgaacccaagtgggactcagcgg
aatgagccagctcttgctcccgccgacctcttcgctccactcgccccactcccaatccct
cctaatttgttaatacccaatccagatgcagaagagccacagcttgcagaccgggctggc
agcaggggacaggctccagctggggctcagcccaagccagaacccagcccagaagcccag
gagctcagctcttcagcatcagcccctggtcctgaactcacgccctccagactggatggt
tcccagggaggagagctctcgcgctgtagctcaatgagctcgctctcacaggaagtgagc
cggcattttcatcaggctaccggtgaccacggccctgctggggcccctcccagtggggca
gtgcccttctacaaccctgctcacctagcacaggcctctgtcaactcggggaattcaaga
ctgggaagaattggccagaggaaatacccggtgttgaactag
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integrated database retrieval system
