Dipodomys ordii (Ord's kangaroo rat): 105995876
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Entry
105995876 CDS
T07834
Symbol
Pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105995876 (Pdlim5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dord04990
]
105995876 (Pdlim5)
Domain-containing proteins not elsewhere classified [BR:
dord04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
105995876 (Pdlim5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105995876
NCBI-ProteinID:
XP_012885229
UniProt:
A0A1S3GAF3
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKACTGSLNMTLQRASATSKPEPVTVQKGEPKEVVKPVPITSPAVSKVTST
TNTAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPPPVAAVPPPPFSASGLH
VNANPSADQCSSALSTGKTAVNVPRQPTTTSVCSEPAQELAEGQRRGSQGDSKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESET
DNAKKANPTEHPTSAGASPRMVCEGADSTSVGRPGAASLTTAAAFRPVASTGIIKPPSWQ
RPTQAAPSTGRISNNVTSSGAGEPAGSAAGQPQPSDQDTLVQRAEHIPAGKRTPMCAHCN
QVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQR
KILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRGCEFP
IEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtccttggttggcccagctccgtggggcttccggcttcaaggt
ggcaaagatttcaacatgcctctgacaatctctagtctgaaagatgggggcaaggcatcc
caggccaatgtgagaataggcgacgttgtcctcagcatcgatgggatcagtgcgcacgga
atgactcatcttgaagcacagaacaagattaaggcttgtacaggctctttgaatatgact
ctgcaaagagcatctgctacatccaagcctgagccagttactgttcagaagggagaacct
aaagaagtagttaagcctgtgcccattacatctcctgctgtgtccaaagtcacttccaca
accaacacggcctacaataaggcacctcggccctttggttctgtgtcttcaccaaaagtc
acctccattccatcaccatcgtctgccttcaccccagcccatgccaccacctcatcacac
gcttcccctccacctgtggctgctgtccctcctccccccttctctgcatctggactgcat
gttaatgccaaccctagtgctgaccagtgttcttctgcactgagcacgggtaaaactgca
gttaatgtcccacggcagcccacaaccaccagcgtgtgttccgagcctgctcaggagcta
gcggagggacagagaagaggatcccagggtgacagtaaacagcaaaatggcccaccaaga
aagcacattgtggagcgcaatacagagttttaccacatacccactcacagtgacgccagc
aagaagagactgattgaggacactgaggactggcgcccaaggactggaacaactcaatct
cgctccttccgaatcctcgcccagatcaccgggactgaacatctgaaagaatcggaaact
gataatgcaaagaaggcaaaccccactgagcaccccacctcggcaggagcctcaccccgg
atggtgtgtgaaggtgccgacagcacaagtgtgggcagaccgggtgcggccagccttacc
accgccgctgccttcagacccgtagcatccaccggcatcatcaaaccacccagctggcag
cggccaacccaagcagcaccttctactggaagaatctcaaacaatgtgacttcctcagga
gccggggaaccagctggctcagctgcggggcagccccagcccagcgaccaggacacattg
gtgcaaagggcggagcacatccccgcagggaagcgaactcccatgtgtgctcactgcaac
caggtcatcaggggaccattcctagtggcactggggaaatcttggcacccagaagaattt
aactgtgctcactgcaaaaacaccatggcctacattggatttgtagaggagaagggggct
ctgtattgtgagctgtgctatgagaaattctttgctcctgaatgtggtcgatgccaaagg
aagatccttggagaagtcatcaatgctttgaaacaaacttggcacgtttcctgttttgtg
tgtgtggcctgtggaaagcccattcgtaataatgtatttcacctggaggatggggaaccc
tactgtgagactgattattatgccctttttggtactatatgccgtggatgtgaattcccc
atcgaagctggggacatgttcctggaagccttgggttatacctggcatgatacttgcttt
gtatgctcagtgtgctgtgaaagtttggaaggtcagacatttttctccaagaaggacaag
cctctttgcaaaaagcatgctcattctgtgaatttttga
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