Dipodomys ordii (Ord's kangaroo rat): 105995976
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Entry
105995976 CDS
T07834
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04360
Axon guidance
dord04724
Glutamatergic synapse
dord04726
Serotonergic synapse
dord04929
GnRH secretion
dord04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
105995976 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
105995976 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
105995976 (Trpc1)
04726 Serotonergic synapse
105995976 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
105995976 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dord04040
]
105995976 (Trpc1)
Ion channels [BR:
dord04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105995976 (Trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
LHD_TRPY1
RIN1
DUF2157
Motif
Other DBs
NCBI-GeneID:
105995976
NCBI-ProteinID:
XP_012885348
Ensembl:
ENSDORG00000013958
UniProt:
A0A1S3G940
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MACEESRRKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCEC
TLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFR
NDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIK
YNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLMVGIFWPVLSLCYLIAPKSQ
FGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMI
WSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPT
LVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGL
TQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGE
ELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDK
CTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVM
CCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgaagaaagccggcgtaaactaatggaacgaattcagaaccctgagtattca
acaactatggacgttgcacctgtcattttagctgctcatcgtaacaactatgaaatcctt
accatgctgttaaagcaggatgtgtctctccccaagccgcatgctgttggctgtgagtgc
acattgtgttctgcaaaaaacaaaaaggacagtctccgacattccaggtttcgtcttgat
atatacagatgtttggccagtccagctctgataatgctaacagaagaagatccaattctg
agagcatttgagcttagtgctgacttaaaggagctcagtcttgtggaggtggaattcagg
aacgattatgaggaactagctcgacaatgtaaaatgtttgctaaagatttgcttgcacaa
gcccggaattcacgtgaattggaagtcatcctaaaccatacatctagtgatgaacctctt
gataaacggggactgctagaagaaagaatgaatttaagccgtctaaaactggctatcaaa
tataaccaaaaggagtttgtctcccagtccaactgccagcagttcctgaacacagtttgg
tttggacaaatgtcgggttatcgtcgtaagcccacctgtaagaagataatgactgtctta
atggttggcatcttttggccagttttatcattgtgttatttgatagctcccaaatctcaa
tttggaagaatcatccacactccttttatgaaatttattattcatggagcctcgtacttc
acattcctgctgttattaaatctgtactctcttgtctacaatgaggataagaaaaacaca
atggggccagcccttgaaagaatagactaccttcttattctgtggattattgggatgatt
tggtcagacattaaaagactctggtatgaaggattggaagactttctagaagaatctcga
aatcagctcagctttgtcatgaattccctgtatttggccacctttgctctcaaggtggta
gctcacaacaagtttcacgacttcgctgatcgcaaggactgggatgccttccatccgacc
ctggtggcagaagggctgtttgcctttgcaaatgtgctgagttatctccgtctgtttttt
atgtataccaccagctctgtcctgggtcccttacagatttctatgggacaaatgttgcaa
gattttggaaaatttctcgggatgttccttctcgttttgttttccttcacaattggactg
acacaactctatgataaaggctacacaccaaaagaacagaaggactgtgtgggcatcttt
tgtgaacagcaaagcaatgatactttccattcgttcatcggcacttgctttgctctgttc
tggtatattttctccctagcccatgtggcaatctttgtcacaaggttcagctatggagaa
gagctgcagtcctttgttggcgccgtgatcgttggcacttacaacgttgtggttgtcatc
gtccttaccaagctgctggtcgccatgcttcacaaaagctttcagttgatagcaaatcat
gaagacaaggaatggaagttcgcccgagcaaagctatggcttagctattttgacgacaag
tgtacacttccgccacccttcaacatcattccttcaccaaagaccatctgctacatgatc
agcagcctcagtaagtggatttgctctcacacttcaaaagggaaggtcaagcggcaaaac
agtttaaaggaatggagaaacttgaaacaaaagagagatgagaactaccagaaagtgatg
tgctgcttagtgcatcggtatttgacctccatgagacagaggatgcagagcacagatcag
gccactgtggagaacctaaatgagctgcgccaagacctgtccaagttccggaatgaaata
agggatttgcttggctttcggacttccaaatatgctatgttttatccaagaaattaa
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