KEGG   Dipodomys ordii (Ord's kangaroo rat): 105996001
Entry
105996001         CDS       T07834                                 
Symbol
Trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dord00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dord01009]
    105996001 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dord04121]
    105996001 (Trim42)
Protein phosphatases and associated proteins [BR:dord01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105996001 (Trim42)
Ubiquitin system [BR:dord04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    105996001 (Trim42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 105996001
NCBI-ProteinID: XP_012885392
Ensembl: ENSDORG00000009003
UniProt: A0A1S3GBI9
LinkDB
Position
Unknown
AA seq 723 aa
METAMCVCSPCCTWERCCPQLCSCLCCKFFFTSERNCTFFPCPYKDERNCQCCHCTCAEN
PNCHWCCCSWANDPNCKYCCTASSNIKCYYYESRCCRNATITFRKGRLRSIQTSSKMALR
VGSSDTQVDEVKSIPANCHLTDHLTCPQCHRLRLHSFMLPCNHSLCEKCLRHLQKHAEIT
ENFFILICPVCSRSHCMPYSHTMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRSRRIAYKRCITCRLNLCNECLKAFHSDVAMQDHVFVDTSAEDQDEKVCIHHPSSRINE
YCRSDNQLLCTFCKIAFHNGHDTVGLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVTVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTFRPDPQLRLHSLHCIPLDFA
ELSSAIHELFPMGPKKVSSSSVELHPTPYPVQSEMMIARKVTFSTHSFNNQQVYQRSSSL
LSFHANEKAKMGLEAYGRTQSAAPPKPTEGLYTYWSAPVENQPTQNSSSFHNWYSFSDAS
VKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTSPPNNVRTELCGQIRDIM
QQNLELHNLTPNTEYLFKVRAINENGPGQWSDTCKVVTPDGRGKNRAKWGLLKSIQSTLQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagaccgctatgtgtgtttgctccccatgctgtacatgggagagatgctgtcctcag
ttatgctcctgtctctgctgcaagttcttcttcacctcggagcggaactgtaccttcttc
ccttgcccttacaaggatgagcgcaactgccagtgctgccactgtacctgcgccgaaaac
cccaattgccactggtgttgctgttcctgggccaatgaccccaactgcaagtactgctgc
acagccagcagcaacatcaagtgctactattatgagagccgctgctgcaggaatgccacc
atcaccttccgcaagggtcggctccggagcatccagacctcctctaagatggccctgcgt
gtgggaagcagtgacacccaggtggatgaagtgaagtcgataccagccaactgccacctg
acagaccatctcacctgcccccagtgccaccggctgcgcctgcattccttcatgctaccc
tgcaaccacagcctgtgtgagaagtgcctgcgacacctgcagaagcatgctgagatcacc
gagaatttctttatcctcatctgcccggtctgcagccgctcccactgcatgccctacagc
cacacgatgcagctgcccgagaactacctgcgtggacgcctcaccaagcgctacatgcag
cagcatggctacctcaagtggcgcttcgaccgctcctcggggcccatcctctgccaggtg
tgccgcagccggcgcatcgcctacaagcgctgcatcacctgccgcctcaacctgtgcaac
gagtgcctcaaggccttccactcggacgtggccatgcaggaccacgtcttcgtagacacc
agcgcagaggaccaggacgagaaggtctgcatccaccacccgtccagccgcatcaacgag
tactgccggagtgacaaccagctgctctgtaccttctgcaagatcgccttccacaacggc
cacgacacggtcggcctcatcgacgcctgctccgagagggctgccgctctcttcagtgcc
attgccaagttcaaagcagtccgatatgaaattgataacgacctgatggaattcaacatt
ttaaaaagcagctttaaagctgacaaggaggcaaagcggaaggagatcagaaacggattt
ctcaagctgcgtagtattcttcaggagaaagagaagatcatcatggaacagattgagaat
ctagaagtgtccaggcagaaggaaatagagaagtacgtgactgtcaccactatgaaagtc
aacgagatggatggtctgatcgcctactccaaggaggccctgaaggagaccggacaagtg
gcattcctgcagtccgccaagatcctggtggaccagattgaagacggcatccagagcacc
tttagaccagaccctcagctgcggctgcactcgctacactgcattccactggacttcgct
gagctctccagtgccatccacgagctcttccccatgggacccaagaaggtaagctcctcc
tcggtggagctgcacccaaccccctaccctgtgcagtccgaaatgatgattgccagaaaa
gtcactttcagcacccacagcttcaacaaccagcaggtgtaccagagaagctcctccttg
ctgtccttccacgccaacgagaaggccaagatgggtctggaggcctacgggagaacgcag
tcagcagcaccccccaagcccacagaaggactctacacctactggagcgctccagtagaa
aaccaacctacacagaacagcagcagcttccacaactggtactcattcagtgacgcctct
gtgaagaccccaggccccatagtcatctaccaaactctggtctacccaagggctgccaag
gtttactggacatgcccaacagaagatgtggactcatttgagatggagttctacgaactg
gtcacttcacctcctaacaatgtgcggacagagctctgtggacaaattcgggacataatg
cagcagaatctggagctccacaacctgactcccaacaccgagtatctgtttaaagtgaga
gccatcaatgaaaacggccctgggcaatggagtgacacctgcaaggtagtcaccccagat
gggcgtgggaagaaccgagctaagtggggcctcctgaagagtatccagtctaccctccag
aagcgcttctaa

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