Dipodomys ordii (Ord's kangaroo rat): 105996057
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Entry
105996057 CDS
T07834
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04136
Autophagy - other
dord04140
Autophagy - animal
dord04211
Longevity regulating pathway
dord05010
Alzheimer disease
dord05014
Amyotrophic lateral sclerosis
dord05016
Huntington disease
dord05017
Spinocerebellar ataxia
dord05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105996057 (Atg13)
04136 Autophagy - other
105996057 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
105996057 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
105996057 (Atg13)
05014 Amyotrophic lateral sclerosis
105996057 (Atg13)
05016 Huntington disease
105996057 (Atg13)
05017 Spinocerebellar ataxia
105996057 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
105996057 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105996057 (Atg13)
03029 Mitochondrial biogenesis [BR:
dord03029
]
105996057 (Atg13)
Membrane trafficking [BR:
dord04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105996057 (Atg13)
Atg1 complex
105996057 (Atg13)
Mitochondrial biogenesis [BR:
dord03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105996057 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105996057
NCBI-ProteinID:
XP_012885460
Ensembl:
ENSDORG00000000382
UniProt:
A0A1S3G9U0
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDAGV
TYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPTQPTHGAQADQERLATHTPSDGI
HCAVTPSSSEDAETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMF
APKNLELEDADPMVNPPESPETASPLHGSLHSNGSSGGSSGNAHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPERLAVHEKNVREFDAFVETLQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgaaaagatttgcactcgt
tcatcttcttccccaacgggttcagattggtttaacttagcaatcaaagacatcccagaa
gtaacacatgaagcaaagaaggcattggcagggcagctgcctgcggttgggcgctctatg
tgtgtggagatctcactcaagacttctgagggagattctatggagctggaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcttacacagtctataacaga
ctgtcactgctgctgaagtctcttcttgctataactagggtgacaccagcctacagacta
tccagaaaacaagggcatgaatacgtcatattgtacaggatatattttggggaagttcag
ttgaatggcttaggagaaggcttccagacggttcgtgttgggacagtgggtactcctgtt
ggtaccatcactctttcttgtgcttacagaattaacttggcattcatgtctaccaggcaa
tttgagagaaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
cctagctcctctcccatgcacccctgcaattacagaactgcaggtgaggatgctggagta
acatatccatcagtggaagactctcaagaagtgtgtaccacctctttttccacatcccct
ccctcccagctcatggttccagggaaggaaggtggggtaccccttgctcccacccagcct
actcatggcgcccaggctgaccaggaaagattggcaactcacacaccttccgatgggatc
cactgtgcggttaccccttccagcagtgaggatgctgaaactgtatctaacagcagcgag
ggacgggcctccccacatgatgtcctagaaaccatctttgtccgaaaagtgggagccttt
gtcaacaaacccatcaaccaggtgactctgacaagtttggacataccttttgccatgttt
gctcccaagaatttggagctggaagatgccgatcctatggtaaatcctcccgagtcccca
gagacagcatctcctctccacggcagcctgcactccaatggctccagtggaggcagcagt
ggcaatgcgcatgatgactttgtgatgattgacttcaaacctgctttttctaaagatgac
attcttccaatggacttggggactttctatcgtgaatttcagaaccctcctcagctgagc
agcctttccatagatattggagcccagtccatggctgaagacttggattcactaccagag
aggctggctgtgcatgagaagaacgtccgcgaatttgatgcctttgtagaaaccctgcag
taa
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integrated database retrieval system
