Dipodomys ordii (Ord's kangaroo rat): 105996300
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Entry
105996300 CDS
T07834
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03022
Basal transcription factors
dord05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105996300 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
105996300 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
105996300 (Taf4)
03036 Chromosome and associated proteins [BR:
dord03036
]
105996300 (Taf4)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105996300 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
105996300 (Taf4)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105996300 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
105996300
NCBI-ProteinID:
XP_012885793
Ensembl:
ENSDORG00000006800
UniProt:
A0A1S3GAD7
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPLCCGHPGLLSSLSPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQSTMAPRPATP
TSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGS
AQTASLGTATAVQTGTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTE
TAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFI
QQSQQQPPPASQATTALTAVVLSSSVQRTAGKTAASVTSALQPPVISLTQPTQVIQQPPK
PGALIRPPQVTLTQTPMVALRQPHNRIMLTTSQQIQLNQLQPVPVVKPTVLPGTKALSTV
SAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCK
DDTFLLPAPLQRRMLEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSY
KDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCAGPGSGAEGSGPGAAVPGSSGVGAPR
QFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtgctgtgggcatcctggtctcctgtcttctttgtctccagggatggtcctc
gtgcggagtgagaatgggcagctgttaatgatccctcagcaggccctggctcagatgcag
gctcaggcccatgcccaggcccagccacagagcaccatggctccgcgccctgccactccc
acaagtgcccctcctgtccagatatccaccgtacaggctcctgggacacctattattgca
cggcaggtgaccccaactaccataattaagcaagtgtctcaggctcagacaacggtacag
cccactacaaccctgcaacgctccccgggggttcagcctcagcttgttctgggtggctct
gcccagacagcctctcttgggacagcaacagctgttcaaacaggaacacctcagcgaacg
gtcccaggggccaccaccacctccacagctgccacggaaactatggaaaacgtgaagaaa
tgtaaaaattttctatctacgttaataaaactggcctcatctggtaaacagtctacagag
acagcagctaatgtgaaagaactagtgcaaaatttactggatggaaaaattgaagccgaa
gattttactagcaggttataccgagaacttaattcttcacctcaaccttaccttgtgcct
ttcctgaagaggagcttacccgccttgagacagctgacccccgactccgcggcctttatc
cagcagagccagcagcagccgccaccagcctcgcaggccaccaccgcactcacagccgtg
gtgctgagcagctcggtgcagcgcacagccgggaagacggctgcctcagtgaccagcgcc
ctccagccccctgtcatcagcctcacgcagcccacacaggtgatccagcagccccccaag
cctggagccctgatccggcccccgcaggtgaccttgacgcagacgcccatggtcgcactg
cggcagcctcacaaccggatcatgctcaccacatctcagcagatccagctgaaccagctg
cagccagtccccgtggtgaaacccaccgtgttacctggaaccaaagccctttctactgtc
tcggcacaagcagctgctgcacagaagaacaagctcaaggagcctgggggaggttcgttt
cgggatgatgatgacatcaatgatgttgcatcgatggctggagtaaacctgtcagaagaa
agtgcaagaatactggccacaaactctgagttggtggggacactcacccggtcctgtaag
gacgacaccttcctgctccccgcacccttgcaaaggaggatgttggaaatcggtaaaaag
cacggcataacggaattgcacccagatgtagtgagttatgtatcccacgccacgcagcag
aggctacagaatcttgtagaaaaaatatctgaaacggctcagcaaaaaaacttctcttac
aaggatgatgacagatatgaacaggcaagtgatgtccgggctcagctcaaattttttgaa
caacttgaccagattgaaaagcagagaaaagatgagcaggagagggagatcctgatgcgg
gcagccaagtctcgatccagacaagaagatccagaacaattaaggttgaagcagaaggca
aaagagatgcagcagcaggagctggcacaaatgcgacagcgagatgccaacctcacagcg
ctggcggccattgggcccaggaaaaagaggaaagtggactgcgcggggccaggatcagga
gcagagggctcaggccccggcgcggcagtcccaggcagctccggcgtgggcgcccccagg
cagttcacacggcaaagaatcacccgggtcaacctcagggacctcatattttgtttagaa
aatgagcgcgagacaagccattcactgttgctctacaaagcattccttaagtaa
DBGET
integrated database retrieval system
