Dipodomys ordii (Ord's kangaroo rat): 105996301
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Entry
105996301 CDS
T07834
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03082
ATP-dependent chromatin remodeling
dord05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105996301 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
105996301 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dord03036
]
105996301 (Ss18l1)
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105996301 (Ss18l1)
GBAF(ncBAF) complex
105996301 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
105996301
NCBI-ProteinID:
XP_012885795
Ensembl:
ENSDORG00000003324
UniProt:
A0A1S3GAS1
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MLDENHHLIQCILDHQSKGKTAECAQYQQLLHRNLVYLATIADSSQNMQSLLPAPPTQNM
NLGPGTLSQSGSGQSLHSQGSLSDAISTGLPPASLMQGQMGNGPNHVSMQQTAQSTLPTT
SVSMSGSSHGTGPGYSHSGPASQSVPMQGQGAIGNYVSRTNINMQSNPVPMMHQQAATSH
YNSAQGSSQHYQGQSSIAMMGQGGQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYSEQY
SHGQGAAEPMTQQYYPDAFWRPRQNYEFQARLDYRVSRFEVQLGTQLGFLEHTEQNMLAE
EAARWGHPDPPAPRALGAAAQAAQTDVSRALLSAGNSQYSQQQAGYQQGSAQPQTYPQQQ
YANQQSYPGQQQGYGPAQGAPSQYSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQY
GNYQQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgaaaaccaccacctgatccagtgtatcctggaccaccagagcaagggcaaa
acagccgagtgtgcccagtaccagcagctcctgcatcgaaacctggtgtacctggccaca
atcgcagactccagccagaacatgcagtctctgcttcccgcgcctccaacccagaacatg
aacctgggcccaggcaccctgagtcagagcggatccggccagagcctgcactcgcagggc
agcctcagcgatgccatcagcacaggcctgcccccggcctcgctcatgcagggccagatg
ggcaacggccccaaccacgtgtccatgcagcagaccgcgcagagcacgctgcctaccact
tctgtgagcatgtcaggcagcagccacggaaccgggcccggctacagccactccggcccc
gcctcgcagagcgtccccatgcagggccagggtgccattggcaactacgtgtctcggacc
aacatcaacatgcagtccaacccagtgcccatgatgcaccagcaggctgccacgtcccac
tacaactcggcgcagggcagtagccagcactaccagggccagtcctccatcgccatgatg
ggccagggcggccaggggagtagcatgatggggcagcggcccatggcgccctaccggcct
tcgcagcaaggctcttcccagcagtacctgggccaggaagagtactacagcgaacagtac
agccacggccagggcgccgctgagcccatgacccagcagtactaccctgatgcattctgg
aggccgaggcagaattatgagttccaggccagactagactacagagtgagtagatttgaa
gtacagctggggacacagctgggcttcctggagcacaccgagcagaacatgttagctgaa
gaagctgctcggtgggggcaccccgacccccccgctccgagggcgctgggggcagcggcg
caggcggcgcagacagacgtgagcagggcccttctctctgcaggcaactcgcagtacagc
cagcagcaggccggctaccagcagggctcggcgcagccgcagacatacccccagcagcag
tatgccaaccagcagagctatcccgggcagcagcaaggctatgggcctgctcagggcgcc
ccctcgcagtactccagctaccagcaaggacaaggccagcagtatgggagctacagagcc
tcacagacgggaccctctgcccagcagcagcgaccttacggctatgaacagggccagtat
ggaaactaccagcaataa
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integrated database retrieval system
