Dipodomys ordii (Ord's kangaroo rat): 105996414 Help Entry 105996414         CDS       T07834                                  Symbol Copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism dord  Dipodomys ordii (Ord's kangaroo rat) Brite KEGG Orthology (KO) [BR:dord00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dord04131]     105996414 (Copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:dord04147]     105996414 (Copa) Membrane trafficking [BR:dord04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     105996414 (Copa) Exosome [BR:dord04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    105996414 (Copa)   Exosomal proteins of bladder cancer cells    105996414 (Copa) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st TPR_COPA_B WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Motif Other DBs NCBI-GeneID:  105996414 NCBI-ProteinID:  XP_012885946 Ensembl:  ENSDORG00000003178 UniProt:  A0A1S3GAU3 LinkDB All DBs Position Unknown AA seq 1220 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHVSSQNLISVYNLIVSSF FFLYSVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGI TGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDT CRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN LFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFP VFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARN RFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLA SVNISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYT TSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALI NRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEA AKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAE IRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKET IPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTVGTEG WGEDAELQLDEDGFVEAPEGLGDDSLGKGQEEGGGWDVEEDLELPPELDVSPGAAGGAED GFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVVQFGPYKQLFLQTYA RGRTTYQALPCLPSMYNYPNRNWKDAGLKNSVPAVGLKLNDLIQRLQLCYQLTTVGKFEE AVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRI CEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKI LSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVT TVTEIGKDVIGLRISPLQFR NT seq 3663 nt NT seq  +upstreamnt  +downstreamnt atgctcaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa agaccctggatcttgaccagcttacataatggagtaatacagttatgggactatcgaatg tgcaccctcattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat aaacagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac aagcttcgacgctgtctcttcacattgcttggacacttggattatattcgtaccacgttt tttcatcatgtaagtagccagaatttgatttctgtatataatttaatagtttcttctttt tttttcctctacagtgtgttaacaggccacaatcattatgtaatgtgtgctcagttccat ccctccgaagacttggttgtatcagctagcctggaccagactgtacgcgtttgggatatt tctggtttgaggaaaaaaaacttgtctcctggtgcagtggagtcagatgtaagaggaata accggggttgatctgtttggaactacagatgcggtggtgaaacatgtactagagggtcat gatcgtggggtaaattgggctgccttccaccctactatgcctcttattgtatctggagca gatgaccgacaagtgaagatctggcgcatgaatgaatcaaaggcatgggaggttgacacc tgtcgaggtcattacaacaatgtgtcttgtgctgtcttccatcctcgccaagagttgatc cttagcaattctgaggacaaaagcattcgagtctgggatatgtctaagcggactggtgtt cagaccttccgtagggaccatgatcgtttctgggtcctagctgctcaccccaaccttaac ctctttgcagcagggcatgatggtggcatgattgtgtttaagctagaacgggaacggccc gcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattcttacgtcaactg gatttcaatagctccaaagatgtagctgtgatgcaattgcggagtggttccaagtttccg gtgtttaatatgtcttacaatccagcagaaaatgcagtcctactgtgtacaagagctagc aatttagagaatagtacctatgatctgtataccatccccaaagatgccgactcccagaat cctgatgcccctgaagggaaacgatcctcaggcctgacagccgtttgggttgctaggaat cgatttgctgtcctggatcggatgcattcgcttctgatcaagaatctgaagaatgagatc accaaaaaggtgcaggtgcccaactgtgatgagatcttctatgctggcacaggcaacctc ctgcttcgagatgcagattctatcacactctttgatgtacaacagaaacggactctggca tctgtgaatatatctaaggtgaaatacgtcatctggtcagcagacatgtctcatgtagca ctactagctaaacatgccattgtgatctgtaaccgcaaactggacgctctgtgtaatatt catgagaacattcgtgtcaagagtggggcctgggatgagagtggggtatttatctatacc acaagcaaccacatcaaatatgctgtcaccactggagaccatgggatcatccggactctg gatttacccatctatgtcacacgagtgaagggcaacaatgtgtactgcctagacagggag tgtcgtcctcgggtactcaccattgatcctactgagttcaaattcaagctggctctgatc aacagaaaatatgatgaggtactgcacatggtgaggaatgccaaactagtaggccagtct atcattgcttatctccagaagaagggctatcctgaagtagcattgcattttgttaaagat gaaaaaacacgctttagtctggccctggagtgtggaaacattgagattgctctggaagca gccaaagcactggatgacaagaactgttgggagaaactgggagaagtggccctgctacag gggaaccatcagattgtggaaatgtgctatcagcgcaccaaaaactttgacaaactttcc ttcctgtaccttattactggcaacctggagaaacttcgcaagatgatgaagattgctgag atccgaaaggacatgagtggccattatcagaatgcactctacttgggtgatgtgtcagag cgagtgcgaatcctgaagaactgtgggcagaaatccctggcctatctcacagctgctacc catggcttagatgaagaagctgaaagcctgaaggagacatttgatccagagaaggagaca atcccagacattgaccctaatgccaagctgctccaaccacctgcaccgattatgccatta gataccaattggcccttattaactgtgtccaaaggattctttgaaggttctattgccagc aagggaaagggaggagcactggctgccgacattgacattgacaccgttggtactgagggc tggggagaggatgcagaactacagctggatgaagatggatttgtggaggctccagaaggt ttgggggatgattctcttggcaaggggcaggaagaaggaggtggctgggatgtagaagaa gatctggagcttccccctgaactggatgtatctccaggagcagctggtggggctgaagat gggttctttgtgcccccaaccaaagggacaagtccaactcaaatctggtgcaataactca caacttccagtcgatcacatcctggcaggctcttttgaaacagccatgcggctccttcat gaccaggtaggagtagtacagtttggcccctacaagcaactgttcctgcagacatatgct cgaggccgcactacctatcaggctctgccctgcttgccctccatgtataactaccctaat cgaaattggaaggatgcagggctgaagaacagtgtgccagctgtgggcctgaagcttaat gacctcatccaacggttgcagctgtgctatcagctcaccacagttggcaagtttgaggag gctgtagaaaagttccgttctatcctactcagtgtgccacttcttgttgttgacaataaa caggagattgcagaggcccagcagctcatcaccatttgccgtgaatatattgtgggtttg tcaatggagatcgaaaggaagaagctgcccaaagagactttagaacagcagaagcgcata tgtgagatggcagcctatttcacacactcaaacctgcagcctgttcacatgatcctggtg ctgcgaacagccctcaacctcttttttaaactcaagaacttcaagacagcagccactttt gctcgacgcctcctggaacttgggcccaagcctgaagtggctcaacagacccgaaaaatc ctgtctgcctgtgagaagaaccctacagatgcttaccagctcaattatgacatgcacaac ccctttgacatttgtgctgcatcctatcggcccatctaccgaggaaaaccagtggagaaa tgtccactcagtggggcttgctattcccctgagttcaagggtcaaatctgcagggtcact acagtgacagagattggtaaagatgtgattggtctgagaatcagtcctcttcagtttcgc taa

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