Dipodomys ordii (Ord's kangaroo rat): 105996525
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Entry
105996525 CDS
T07834
Symbol
Smg5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105996525 (Smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105996525 (Smg5)
03032 DNA replication proteins [BR:
dord03032
]
105996525 (Smg5)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105996525 (Smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
105996525 (Smg5)
DNA replication proteins [BR:
dord03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105996525 (Smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
105996525
NCBI-ProteinID:
XP_012886105
Ensembl:
ENSDORG00000010382
UniProt:
A0A1S3GBN8
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MSQGPPAGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLFDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSIDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRTGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQNDGTDE
PDSKEPGDKEEELDPEPPPTAQVGEGRKSRKFSRLSCLRRRRHHAPKAGDDSDLSEGFES
DSSHDSARASEGSDSGSDKSLEGRGTAFDAETDSEMNSQESRSDLEDMEDEDGTQSPAIE
PPRSRSEASDSLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTASEPH
NLSGCRPCVNGDVDKPSEPVLSPISTPASEEGSESEGSESSGRSCRNERSLQEKLQVLMA
EGLLPAVKVFLDWLRTNPDLIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLVLCREAQ
DLLESCELPELPASLLLPEDMALRNLPPLRAAHRRFNFDTDRPLLSTLEEAVVRICCIRS
FGHFVARLQGSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQL
RLQLEVSQLEGSLQQPKAQSAMSPYLVPDTPALCHHLPVIRQLASSGRFIVIIPRTVIDG
LDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDTDAWTLYKILDS
CKQLTLAQGTGEEDPSGMVTIITGLLLDNPSALSGPMQAALQAAAHASVDVKNVLDFYKQ
WKEIG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggtccccctgcaggggagagcagcgagcccgaagcaaaggtcctccacact
aagcggctttaccgggctgtggtggaggctgtgcatcgacttgatctcatcctttgcaac
aaaactgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgtgtcaagctcatgttcctgcatccagtagactatggaaggaaggctgaagaa
ctactgtggagaaaggtatactatgaagttattcaacttatcaagactaataaaaagcac
atccacagcaggagcacattggaatgtgcttacaggacacacctggtcgctggtattggc
ttttaccagcatctccttctttatatccagtcccactatcagcttgaactgcagtgctgc
attgactggacccatgtcactgatcccctcataggatgtaagaagccagtatctgcctca
ggaaaggaaatggattgggcacagatggcatgtcacagatgtctggtgtacctgggggat
ttgtcacgctatcagaatgaattggctggtgtagacactgagcttctagctgagagattt
tactaccaagccctttcagtagctccccagattggaatgcccttcaaccaactgggtacc
cttgcaggcagcaagtattataatgtggaagccatgtattgctacctgcgatgcatccag
tcagaagtgtcctttgagggagcttatgggaacctcaagcggctctttgataaggcagcc
aaaatgtaccaccagctgaagaagtgtgagactcggaaactgtctcccagcaaaaagcga
tgtaaagacattaaaaggttgctggtgaactttatgtacctgcagagcctcttgcagccc
aaaagtagctccatagactcagagctgacctcactttgccagtctgtcctggaagacttc
aatctctgtctcttctacctgccctcttcacccaaccttagcctggccagtgaggatgaa
gaggaatatgagagtggatatgctttccttcctgacctgctcatctttcagatggtcatc
atttgccttatgggtgtacacagcttaaagagaacaggatccaagcagtacagtgcagcc
attgctttcaccttggcccttttctcccatcttgtcaatcatgtcaacatacggctgcaa
gctgagctagaagaaggagagaaccctgtcccagcattccagaatgatggcacagatgaa
ccagactccaaggaaccaggggacaaagaggaggaactggatccagagcctcctcccaca
gcccaagtgggtgagggccgaaagagccgtaagttttctcgactctcctgcctccgtcgc
cgccgtcaccacgcacccaaagctggtgatgacagtgacctgagtgaaggctttgaatcg
gactcaagccatgactcagccagggccagtgagggctcagatagtggctctgacaagagt
ctggaagggaggggcacagcttttgatgcagagacagactcagaaatgaacagccaggag
tctcgatcagacctggaagatatggaagatgaggacgggacacagtccccagccatcgag
ccccctcggtccagatcggaggcttctgattccctcaatggacctctgggtcccagtgaa
gctagcattgccagcaatttgcaagccatgtccactcagatgttccagaccaagcgctgc
ttccgactggctcctacctttagcaacctgctcctccagcccactgcttccgaacctcac
aacttgtctggctgtagaccctgtgtcaatggagatgtggacaaaccctcagaaccagtt
ctctctcctatctccaccccagcctctgaggagggctctgagtcagaagggagtgagtcc
agtggacgctcatgtcgcaatgaacgcagtctccaggagaaactgcaggtcctgatggct
gagggtctgcttcctgctgtgaaagtcttcctggactggctgaggactaaccctgacctc
attgtcgtgtgtgcacagagctctcaaagtttgtggaatcgcctgtctgtcttgttgaat
ctattgccagctgctggtgaacttcaggagtctggcctggtcttgtgtcgggaggcccaa
gatcttcttgaaagttgtgaactgcctgaacttcctgctagcctcctgctcccagaggac
atggcacttcgcaacctgcctcctctccgggctgctcacagacgctttaactttgacacg
gatcgacccctgctcagcaccttagaggaggccgtggtacgaatctgctgcatccgcagc
tttggtcacttcgttgcccgcctacaaggcagtatcctgcagttcaacccagaggttggc
atctttgtcagcattgcccagtctgaacaagagagtcttctgcaacaggcccaggcccag
ttccgcatggcacaagaggaagctcgacgaaatagactcatgagagacatggctcagtta
cgactgcagctcgaggtctcccagctggagggaagcctgcagcagccaaaggcccagtca
gctatgtctccctacctcgtccctgacaccccagccctctgccaccatctccctgtcatc
cgccagctggcctctagtggtcgcttcattgtcatcatcccaaggacagtgattgatggc
ctggatttactgaaaaaggaacacccaggggcccgggacgggatccggtacctggaagca
gagtttaagaaaggaaacaggtacattcgctgccagaaagaggtgggaaagagctttgaa
cggcataagctgaagaggcaggatacagatgcctggacactctataagatcctggatagc
tgcaaacagctaactctggcacaggggacaggagaggaggacccaagtggcatggtgacc
atcatcacaggccttctattggacaaccccagtgcactgtctgggcctatgcaggcagcc
ctgcaggccgctgcccatgccagtgtagacgtcaagaatgttctggatttctacaagcag
tggaaggagattggttga
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integrated database retrieval system
