Dipodomys ordii (Ord's kangaroo rat): 105996938
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Entry
105996938 CDS
T07834
Symbol
Nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105996938 (Nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105996938 (Nhej1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105996938 (Nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
IMUP
XRCC4
Motif
Other DBs
NCBI-GeneID:
105996938
NCBI-ProteinID:
XP_012886668
UniProt:
A0A1S3GCU9
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MDELEQGLLMQPWAWLQLAENSLLAKAYITKNGYALLVSDLQQVWHEQVDCSVVSQRAKE
LNKRLTAPPAAFLCHLDNLLRPLLKDDTHPGEATFSCDRVAEALILRVRSELSGLPFYWH
FHCIQASPSLVSQHLIRPLMGMSLALQGHVRELTALLRMKDLEIQEYQESGATLSRGRLK
TEPFEENSFLEQFMVEKLPEACSLGDGKPFVTNLQSLYVAVTKQEVQAAQKFQGTGETQI
SSSTSPRGTDSQLLNQPEQPVSAAPAFLAPEHQAMSASDSVQKPQLSKLKRKKPRGLFS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctggagcaaggcctattgatgcagccatgggcatggctacagcttgctgag
aactctctcttagccaaggcttatatcacaaagaacggctatgccttgctggtttcagat
cttcaacaggtgtggcatgagcaggtggactgtagtgtggtcagccagcgagccaaggag
ctgaacaagcgcctgactgctccccctgcagcttttctctgtcatttggataatcttctt
cgtccattgttgaaagatgatactcaccctggtgaagctaccttctcctgtgatcgtgta
gcagaggcactgattttgcgggttcggagtgaactctctggtcttcccttctattggcat
ttccactgtattcaggctagtccttccttggtctcccaacatttgattcgtcctctgatg
ggcatgagtctggcattgcagggccacgtgagggagctaacagcattgcttcgaatgaaa
gacttagagatccaggagtaccaggagagtggggctacactgagccgaggccgattgaag
actgagccatttgaagaaaattctttcttggaacaatttatggtagagaaattaccagag
gcatgtagccttggtgatggaaagccatttgtcacgaatcttcagagtttgtatgtagca
gtcaccaaacaagaggtccaagcagcacagaagtttcaaggcactggagaaactcagatc
tcaagcagcacctcccctcgaggaactgatagccaacttctgaaccagccagaacagccg
gtctctgcagctccagccttcctagcacctgaacaccaggccatgagtgcttcagactct
gtacagaaacctcagctgtcaaaactcaaaaggaagaagccaagggggctcttcagttaa
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