KEGG   Dipodomys ordii (Ord's kangaroo rat): 105996947
Entry
105996947         CDS       T07834                                 
Symbol
Mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dord00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dord03400]
    105996947 (Mdc1)
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    105996947 (Mdc1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 105996947
NCBI-ProteinID: XP_012886635
UniProt: A0A1S3GCU3
LinkDB
Position
Unknown
AA seq 1755 aa
MEDTQTINWDAEEEEETEQSRGSLGHSSEPVGQLRIFSGTHGPEKDFPLYLGKNMVGRSP
ECAVTLPFPSISKQHAVIEILAWNKAPILQDCGSLNGTQILRPPKALSPGVSHRLRDKEL
ILFADFPCQYHRLDVPQPVVSQGPLTVEETPRVQGGTQPSRLLVEDSEEEVDFVSERCVT
KESATTSSPLPTVVPESDEEGPSPAPGGSGTSFPFNLDSDTDEEKDQQPATVETALSSRK
DTTAEAEQPEASGVPTTVRLVKAQSSVENDQGTKIKNVGNGEILKRSQPPEDSDTDVDEE
DRSPGRAADVHLERAQTSGFVDSDTDMEEEGIPATPVVPMKKRQIFHGVGTKDPGTPGVA
HVQESPTGSDTDVEEGKAPLAVPAERNQTSVVINSDTDDEEEVSAALTLACLKENGSVLW
DRGTGMGADREQPVVLQEQSHIDSGKDSDTDMEEEWLPVEKKETVPSGHTDKGGALVIAD
SEKDQLSFSNSDVGEKTDLSSSRIHLQRSQNSSSTVMGNNTEMEEEVPSGPVVTNQEPSE
GTNQIDVEAGGSLAKMPVVPLEEDGLPDENWDTNVIEDRSLVVADVKKNQHLEKENPRPA
DVFEQEQALEVVTQSGTPMTQVEQILLHPVKPTQSQREGAQTPTGRGEKAHKGRTKDSKD
NYDDPEDLDLQATQCFVERENQSVEVVQRMEDEPTQAFTCTLPQEPSPSQTPGAPDEPWE
VLATQPFCLREVEVSEPQPTAAHFEVHRSCQSPSRAVSRDQHPENPVHTEPLEIEGKGMQ
TVEKVMDTPKGTAERVQPEKWLSEREIKGWPSDSEKEDVTGEKELTREIEDKEQNQMLAG
AVQTQEFDTKVKSVSPKRDRESLALEMETSKEIQENEKKEALTREVLERQEDKPVPKKKC
KPAELEVNLDRGEADTGSQNQKGQATSPTPEFRVEAGHLQGLTSGPIVSESQPGGRRRAL
VNPRRQQRGHSKRKMPAAKKASRGEPESPDACLPLSEVSAPPHSPGYLAPQPFLPPSPSS
SEAPTLSKRHSGSQEAPETPLSSESFHPKHIVRPRRSSRTTPSPLSTAPTTPIDQPIPPE
PTYQATRTRTRRTSVKTPEPVVPIAPELQSSTSTKPVSHATRGRALRSSAKTPGPVIPSG
LELQSCISTVQLVTPEPTSHTTRGKTRRSSIQTSRPVVPTGPELQPSTSTAQPVTPKTTS
HTTRGKTRRSSVQTPGPVAPTGPELQPSTSTVQPVTPKTASEATQDRTHGSFDETPETVV
SIGSKLLPSPSTEQHPVTSGPTSRATRGRKNRSSVKTPESVIPTDPDLQPSTSVVQTVTP
KPTSRTTRSRACKSSILTSDPEPFTSIDQPVIPETITHNRTLNFSSVSATPVVATSEVPP
ATIAQPVPLEPMPQANRSRKQDAGKHGSLTPVNLKPCPAPPESKPESSNNQRPGAARAVE
SFGTIPEPASHQLPQAPTHAPRNQKIKTESTSGFTPEPLPKFSQIRKRPSATEGSPPLQK
RPQKTVFLKEEEDTVEEPGKEEDTVIPGPGKRKRDQAEEGPKGPSRSLRRAKPSQGSAPK
VLFTGVVDARGERAVLALGGTLANSVTDASHLVTDRIRRTVKFLCALGRGIPILSLDWLY
QSRKAGHFLPPDEYLVTDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTPGVQPPPPQM
GEIISCCGGTILSNMPRLYKPQRVVITCPEDFPRCSIPCRVGLPLLSSEFLLTGVLKQEA
KPEDFVLSNAEMSST
NT seq 5268 nt   +upstreamnt  +downstreamnt
atggaagacacccagactattaactgggatgctgaagaagaggaggagacagagcaatcc
agaggatccttggggcatagctcggaacctgtggggcaactgagaattttcagtggcacg
catggaccagaaaaagattttccactatatcttgggaagaatatggtaggccgaagccct
gagtgtgcagtgaccctgccctttccatccatctccaaacaacatgcagtgattgaaatt
ttggcctggaacaaagcacccatccttcaggattgtggaagcctcaatggtactcaaatc
ctgaggccacctaaagccttgagccctggagtgagtcatcgtctgagggacaaggaattg
attctgtttgctgactttccctgccagtaccatcgcctggatgtccctcaacccgttgtt
tcccagggccctctaacagtagaagagaccccccgggtacagggaggaactcagccctct
cggcttttggttgaggactcagaggaggaagtagattttgtttctgaaaggtgtgttacg
aaagaatcagcgaccacatcctcccctttgccaacagtggttccagaaagtgatgaagaa
gggccttctccagcccctggtggttctgggacatcttttcccttcaacttggacagtgac
acagatgaggaaaaagaccaacaaccagcaacagtggagactgctttatcttcaaggaaa
gataccactgcagaggcagagcagcctgaagccagtggagttccgactactgtcagacta
gtaaaggctcaatcttcagtggagaatgaccagggcacaaaaattaagaatgtgggaaat
ggagagattctgaagaggagccagcctcctgaggacagtgacacagatgtggatgaagaa
gacagatctcctggcagggcagctgatgtccatttggaaagggctcagacttctggcttt
gtggatagtgatactgatatggaagaagagggaattcctgccacccccgttgttcctatg
aagaagaggcaaatcttccatggagttggtacaaaggatcctggaacacctggtgtggca
catgtgcaagagagcccaactggtagtgatacagatgtggaggagggcaaagctccactg
gctgtccctgcagagagaaaccaaacttccgttgtgatcaacagcgatacagatgatgag
gaagaagtctcagcagcactcacattggcatgtctgaaagagaatggatctgttctatgg
gacagaggcacaggcatgggagcagacagagaacaacctgtagttcttcaagagcaaagc
cacattgactctgggaaagacagtgacacagacatggaagaagaatggctcccagtggaa
aagaaggaaactgtccctagtggtcacacagacaagggtggggctcttgttatagcagat
tcagaaaaagaccaactttcttttagcaacagcgatgtaggtgagaaaacagatctgagc
tcatctaggattcaccttcagagaagccagaactcctcctctactgtaatgggcaacaat
acagaaatggaggaagaagtcccatcagggccagttgttacaaatcaggagcctagtgag
ggtacaaatcaaatagatgtggaagcaggagggagcctagcaaagatgcctgtggttcct
ctagaggaagatggacttcctgatgaaaactgggatacaaatgtgatagaggaccggtcc
ttagtagtagcagatgtgaaaaagaatcagcatctggaaaaagaaaatcctagacctgca
gatgtctttgagcaggagcaagctcttgaggtagtcacccaaagtggaactcctatgaca
caagtggagcagatattattgcacccagttaagcccacccaatcacagagagagggagcc
cagaccccaacaggaagaggggaaaaagcacataagggcaggaccaaggactccaaagac
aactatgatgatcctgaagatctggaccttcaggctactcagtgctttgtggagagagag
aatcagagcgtggaagtagtccagaggatggaggatgaacccacccaggccttcacatgt
accctaccccaggagcccagcccttctcagaccccaggtgccccagatgagccttgggaa
gtcttggctactcagccattctgtctgagagaggttgaggtctctgaaccccagcccact
gctgcccactttgaggttcacagatcttgccaatctccatctagggcagtatcaagagac
cagcatccagagaacccagttcacacagagccattggagattgaaggcaaagggatgcag
actgtggagaaagtaatggacacaccaaaaggaacagcggagagggtgcaacctgagaaa
tggctgtcagagagggaaatcaaaggatggccatcagacagtgagaaagaagatgtgaca
ggggaaaaagaattaactagagagatagaggataaagagcaaaaccaaatgttagctgga
gctgtccaaacacaagagtttgacacaaaagtgaaaagtgtaagtcctaaaagggatagg
gaaagtttggcattagaaatggagacatccaaggaaatacaagaaaacgagaagaaggag
gcccttacaagagaagtacttgagagacaggaagataaaccagtgccaaagaaaaaatgc
aagccagctgagttagaagtgaatctagatagaggggaggcagacactgggagccagaac
cagaaagggcaagccaccagtccaacaccggagtttagagtggaagcagggcaccttcag
ggacttacttcaggccccatagtttctgagagccagccaggtggcagaaggagagcccta
gtgaatcccaggaggcaacaaagaggccactccaagcgcaagatgccagctgctaagaag
gcttccaggggtgaaccagaatccccagatgcttgtctgcctctgtctgaggtttcagcc
ccacctcacagtccaggatatcttgcacctcagccttttcttcctccttctccctcttct
tctgaggcacccactcttagcaaaaggcacagtgggagtcaggaagctccagaaactccc
ttgtcctcagagtcttttcacccaaagcatattgttaggcctcgtcggtcctctaggacg
acaccctctccactctctactgctcctaccactcccatagaccagcccatcccccctgag
cctacatatcaggcaacccgtactaggacacgtagaacctctgtcaagacccctgaacca
gttgtccccatagctcctgaactgcagtcttccacctccaccaagcctgtgtctcatgcc
actcggggtagggcccttagatcctctgccaagacccctggaccagttattccctcaggc
cttgaactccagtcttgtatctccacagtccagcttgtcacccccgagcctacctctcac
accactcgaggcaagacacgtaggtcgtccatccagacctctagaccagttgtccccacg
ggccctgaactccagccttccacctccactgctcagcctgtcacccccaagactacatct
cataccactcgaggcaagacacgcaggtcctctgtccagacccctggaccagttgctccc
acaggtcctgaactccagccttccacttccacagtccagcctgtcacccctaagactgca
tctgaagccactcaagataggacacatgggtcctttgatgagacccctgaaacagttgtc
tccataggctccaaactcctgccttctccctccacggagcagcatcctgtcacctcaggg
cccacatctcgagccactcggggtcggaaaaataggtcctctgtcaaaacccctgagtca
gttatccccacagaccctgacctccagccttccacctctgttgtccagactgtcactccg
aagcctacatctcggactactaggagcagggcgtgtaagtcttccattttgacttctgat
cctgagcccttcacctccatagaccagcctgtcatccctgagactataactcataacagg
actctaaatttttcatccgtaagtgctaccccagttgttgccacctctgaagtccctcct
gccactatagcccagcctgttcccctagagcccatgcctcaagccaatcgtagcaggaaa
caggatgctggaaaacatggttctctcacacctgttaacctcaagccttgccctgcaccc
cctgaatcgaagcccgagtcctcaaataaccaaagaccaggtgctgcaagagcagttgaa
tcctttgggaccattcctgagcctgcctctcaccagcttcctcaggcacctactcatgcg
ccccggaaccaaaagataaaaacagaaagtacatctgggttcaccccagagcctctgcct
aagttttctcaaatccgcaagaggccttctgctactgagggctcaccaccactccaaaaa
cggccccagaagacagtgttcctcaaggaagaggaagatactgtggaggagccagggaag
gaagaggatacagtgatcccaggaccaggcaagaggaagagagaccaggcagaggagggg
cccaaaggaccaagccgcagcctcagacgggccaaacctagtcaaggatcagcccccaaa
gtactcttcacaggagtcgtggatgctcgtggggagcgggcagtgctggcacttgggggg
actctggccaactcagtgacagatgcttcccacctggtcactgaccgaatccgcaggact
gtcaagttcttgtgtgcgctgggaaggggaatccctatcctctctctggactggctatat
cagtctcgcaaggctggtcacttcttgcccccagatgagtatctggtgactgaccctgag
caggaaaagaattttggcttcagccttcgagatgcattgagccgggctcgggagcgaagg
ctgctggagggctatgagattcatgtgacccctggagtccagccaccaccacctcagatg
ggagagatcatcagctgttgtggaggcacgatcctgtccaacatgccccggctctataag
cctcagagagttgtgatcacatgccccgaggatttccctcgttgctccatcccatgtcgg
gtggggctgccccttctctcttctgagttcctgctgactggagttctgaagcaagaagcc
aagccagaagattttgtcctttccaatgcagaaatgtcatctacctga

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