Dipodomys ordii (Ord's kangaroo rat): 105997120
Help
Entry
105997120 CDS
T07834
Symbol
Trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dord03016
]
105997120 (Trmt13)
Enzymes [BR:
dord01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
105997120 (Trmt13)
Transfer RNA biogenesis [BR:
dord03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105997120 (Trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
105997120
NCBI-ProteinID:
XP_012886883
Ensembl:
ENSDORG00000015808
UniProt:
A0A1S3GDF6
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MMAASPPSPCAAGFPAEGRCGYYVEKKKRFCRMVAAAGKRFCGEHAGAAEEENSRKRILC
PLDPKHTVYEDQLAKHLKKCNAREKPKPDFFIQDINAGLKDDTEILEQLVPISSLSEEQL
GNLINKLRKASEGLSSTLNDHIMSHPALHDAINDPRNGDSATKHLKQQASILGNIEKLQL
LGPRRCFVEFGAGKGKLSHWVDVALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQ
IDIQHLCLNKIPVLREGKLPVVGIGKHLCGVATDLALRCLVETYAACYEKRNEEPLAKRI
KNDKTENEINTLAKEGSENNVPEKWTPVAGIVIALCCHHRCEWRHYVGKEYFRGLGLGAV
EFHYFQRMSSWATCGMRKAPLEDTAITTKSKDHQSDDSEEHDDGEYRITDDSTDNLPGIL
TVEEKKKIGHLCKLLIDQGRVQYLQHKGFSPALQNYIDPLVSLENVLLTALPIPSSSLQT
TG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcctcgccgccgagtccgtgcgctgctgggtttccagccgaggggagatgc
gggtactacgtggaaaagaagaagcggttctgcaggatggtggcggccgcggggaagagg
ttctgcggcgagcacgccggcgccgcggaggaagaaaattctcgaaaaagaatcctgtgt
cctttagatccaaaacacacagtatatgaagatcaactagcaaagcatttgaaaaaatgt
aatgcaagagagaagccaaaacctgatttctttattcaagatattaatgcaggcttaaaa
gatgatacagaaatacttgaacaattagttcccatttcttctctatcagaagagcagttg
ggaaacttaattaacaaattgagaaaagcaagtgaaggtttgagttccacacttaatgat
cacatcatgtctcacccagcattacatgatgccattaatgaccctagaaatggggattct
gcaaccaagcacttgaaacaacaggcttctattttaggtaacattgaaaaattacagtta
cttggtccaagaagatgctttgttgagtttggagcaggcaagggaaaattatctcattgg
gttgatgttgccttaaaagatgctgaaaaagttcacttcatcctcgtagaaaaagtaact
acaagattcaaggtggatggtaaacacagaaagaaaaattcagtgttcgaaagacttcaa
attgatattcagcacttatgtttgaacaagattcctgtgctaagagaaggaaaactacct
gtggtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttg
gttgaaacctatgctgcctgttatgagaaaaggaatgaagaacctttagccaaacgcata
aagaatgataaaacagaaaatgaaattaacactttggccaaggaaggaagtgaaaataat
gtcccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacagg
tgtgaatggagacattatgtgggcaaagaatatttcaggggtctaggccttggagcagtg
gaattccactatttccagcgaatgagtagttgggcgacttgtgggatgcggaaagcgcct
ttggaagacacagctattactacaaagagcaaagatcatcaaagtgatgacagtgaagaa
catgatgatggagaatataggatcacagatgacagcactgataatttgcctgggattctc
actgttgaagaaaagaagaagatagggcatctttgtaaactgctgattgatcaaggccga
gttcagtatttacagcacaagggattcagtcctgctttacagaactatatagaccctttg
gtgtctctggaaaatgtattgttaacggccttaccaattccttcttcttcactacaaaca
actggttaa
DBGET
integrated database retrieval system
